Panicum virgatum (switchgrass): 120685320
Help
Entry
120685320 CDS
T07260
Name
(RefSeq) protein disulfide-isomerase-like
KO
K09580
protein disulfide-isomerase A1 [EC:
5.3.4.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120685320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120685320
04131 Membrane trafficking [BR:
pvir04131
]
120685320
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120685320
Enzymes [BR:
pvir01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.4 Transposing S-S bonds
5.3.4.1 protein disulfide-isomerase
120685320
Chaperones and folding catalysts [BR:
pvir03110
]
Protein folding catalysts
Protein disulfide isomerase
120685320
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
PDI family proteins
120685320
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
120685320
Exosomal proteins of colorectal cancer cells
120685320
Exosomal proteins of bladder cancer cells
120685320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thioredoxin
Thioredoxin_6
Thioredoxin_2
OST3_OST6
Thioredoxin_8
Thioredoxin_7
AhpC-TSA
Redoxin
ERp29_N
TraF
DUF4287
Motif
Other DBs
NCBI-GeneID:
120685320
NCBI-ProteinID:
XP_039823097
LinkDB
All DBs
Position
8N:complement(7940156..7944052)
Genome browser
AA seq
513 aa
AA seq
DB search
MATRSPAAWISLLLALALALSARAAEEAPAAAAAEGEAVLTLDVDTFDEAVAKHPFIVVE
FYAPWCGHCKALAPEYEKAAQSLSKHDPPIVLAKVDANEDKNRPLATKYEVQGFPTLKIF
RNQGKNIQEYKGPREAEGIVEYLKKQVGPASKEIKSPEDAASLIDDKKIYIVGVFTEFSG
TEFTNFMEVAEKLRSDYDFGHTLHANHLPRGDAAVERPLVRLLKPFDELVVDSKDFDIAA
LEKFIDASSTPRVVTFDKNPDNHPYLLKFFQSSAPKAMLFVNFSTGPFDSFKSTYAAAAE
EFKDKELKFLIGDIEAAQGAFQYFGLKEEQAPLILIQDGDSKKFLKDHIEADQIVSWLKE
YFDGKLSPFKKSEPIPEVNNEPVKVVVADSLHDVVFKSGKNVLIEFYAPWCGHCKKLAPI
LEEAATTLKSDEEVVVAKMDATANDVPSEFDVQGYPTMYFVTPSGKITSYDAGRTADEII
DFIKKNKETSGATPVSEKAAEAAPASEPVKDEL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccgctcccccgcggcctggatctcgctgctgctcgcgctcgcgctcgcgctg
tcggcgcgcgcggcggaggaggcgcccgcggcggcggcggcggagggggaggccgtgctc
accctcgacgtcgacaccttcgacgaggccgtcgccaagcaccccttcatcgtcgtcgag
ttctacgccccctggtgtggacactgcaaggcgctcgctccagagtatgagaaggcggca
cagtcgctcagcaagcacgacccaccgattgttctcgctaaggttgatgccaacgaggac
aagaacaggccgcttgctaccaagtacgaggtccaagggttcccgaccctcaagatcttc
aggaaccagggcaagaacattcaagagtacaagggaccaagggaggccgagggcatcgtt
gagtacctgaagaagcaagtcggccctgcctccaaggagatcaagtccccggaagatgcg
gcatcccttatcgatgacaaaaagatctacatcgttggtgtcttcacagaattcagtggc
actgagtttacaaatttcatggaggttgctgagaagctgaggtctgactacgactttggc
cacactctgcacgccaaccacctcccacgtggtgatgctgcggtggagaggccattggtt
aggctgttgaagccatttgatgagcttgttgttgacagcaaggattttgatattgctgct
ctggagaagtttattgatgctagcagcaccccccgagttgttacttttgacaagaaccct
gacaaccacccataccttttgaagttcttccaaagctcagcccccaaggctatgctattt
gtgaacttctccactggaccttttgactccttcaagtctacttatgctgctgccgcagag
gagttcaaggacaaggaactcaagttcctcattggtgacattgaagctgcccagggtgcc
ttccagtactttggtctgaaagaggagcaagcaccccttatcctcatccaggatggtgac
tccaagaagttcttgaaggatcacattgaggcggaccagattgtctcttggttgaaggaa
tactttgatggcaagttgtcaccgttcaagaagtctgagcctattcctgaggtcaacaac
gagcctgttaaggtggttgtggctgacagcctccacgatgtggtgttcaagtctggcaaa
aatgttcttatcgagttctatgccccctggtgtggacactgcaagaagttggcccctatc
ttggaggaggcagccaccacacttaaaagtgatgaggaagtcgtggttgccaagatggat
gccaccgcaaatgacgtgcccagtgagttcgacgtccagggctacccaaccatgtacttt
gtgacccccagcgggaagatcacctcctacgacgctggcaggacggctgatgagatcatt
gacttcatcaagaagaacaaggagacgtccggcgcgacgcccgtgtccgagaaggcagcg
gaggcagccccagcctccgagcccgtgaaggacgagctgtaa
DBGET
integrated database retrieval system
