Panicum virgatum (switchgrass): 120685324
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Entry
120685324 CDS
T07260
Name
(RefSeq) formin-like protein 7
KO
K15559
regulator of Ty1 transposition protein 103
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120685324
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120685324
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
DUF3490
ALIX_LYPXL_bnd
TEX13
Motif
Other DBs
NCBI-GeneID:
120685324
NCBI-ProteinID:
XP_039823102
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All DBs
Position
8N:complement(1032189..1040554)
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AA seq
591 aa
AA seq
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MAGAKADVDAETGDGGGAAGGAGGGGGGSFSEHRLVDKLNKLNSSAASIQTLSQWCIFHR
KRAKRVVDTWEKQFNSATKDKKVSFLYLSNDILQNSKRKGGDFVNEFWRVLPRSLKHVYE
NGGEEGKKVVARLIGIWDERKVFGTRIESLKDGIFGNNPHILDNNGNSSNPSSNPPSNSK
VSRKDSGTTVKKLTVGGMPEKIVTAYQSVLDQHFDEEAALNKCKSTVGVLERINKDINDA
STNGNQPASTLISDLQEQEMTLKQCIEQLESVDAARISLINQLKEALSEQESKSVVLRSQ
LQVARASAERVIQLRQQLGGALSTSATQSSPSPLMITPPEQTAGTVQGSGVRSTPPQSQP
LTPATSLRPTFSAVGDESKRSAAAMADKLASLSAPVLSSILSSLAAEQAASINGGSPSGE
LSGGPPGFQIEKRPRLEKQAGDMGASPFFGQAPQVQQQIGAVPTTLGGTQPPTPVPFPPP
PPPLPSLLPPLLQQFGQNTGGMIGMGGPFGMMAGSMPPPPPLSNILPAGFPGPSGPPPPP
PLPPAQSQPQQQQQSPQAPQQSPTSTGFFQSSGMSFFPPVQVQQSPSAQRQ
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgaaggcggatgtagacgcggaaacgggggacggcggcggcgccgcaggt
ggcgccggcggcgggggaggcggctccttcagcgagcacaggctggtcgacaagctcaac
aagctcaacagctcagcggcgagtattcagacactttcacaatggtgcatttttcaccgc
aagagggccaaaagggttgtagacacatgggagaagcagtttaatagtgcaacaaaggat
aagaaagtatcattcctgtatctatcgaatgatatcctgcaaaacagcaaacgcaaggga
ggtgactttgtgaatgagttctggagggttctacctagatcactgaaacatgtctatgaa
aatgggggagaagaaggaaagaaagtggtggcaagattaataggaatttgggatgaacgt
aaggtttttgggactcgtattgaaagtctgaaagatggcatttttggtaacaaccctcat
attttggataacaacgggaatagttcaaatcctagctctaatcccccttcaaattccaaa
gtttcacggaaggattctggtacgacagtaaaaaaacttactgttggtgggatgcctgaa
aagattgtaactgcataccaatcggtccttgatcaacattttgatgaagaggcagcttta
aacaaatgtaagagtactgttggtgttttggagaggataaataaagatataaacgatgct
agcaccaacggtaatcagccagcatcaacattgatttccgaccttcaagaacaagaaatg
accctaaagcagtgcattgaacaacttgaaagtgtagatgcggcgaggatatccctgatc
aatcaattaaaagaagctctcagcgaacaggagtcaaagtcagtggttcttcgcagccag
ttgcaagttgctcgagcatcggctgaacgtgtcattcaacttagacaacaactgggtggt
gcccttagcacaagcgccacacaatctagtcctagtccgctcatgattactccaccagag
caaacagctggtacggtgcaaggttcaggagtaaggtcgacacctccacagtcacagcca
ctgactccagcaacctcacttcggcctacattcagtgcagtgggtgacgagtccaagagg
tcggcagcagctatggcagataagcttgcatctttgtcagcacctgtgctgagctccatt
ctctcatctcttgccgctgagcaagctgcttccataaatggtggatcaccttctggagaa
ttatctggaggaccaccaggcttccagattgaaaagaggcctaggcttgagaagcaggct
ggtgatatgggtgcttctcccttttttgggcaagcgccacaggtgcaacaacagattgga
gcagtgcctactactcttggaggcacgcaaccaccaacgccagttccatttccaccacct
ccaccgccattgccatctctattgccaccacttctacaacaatttggtcaaaatactgga
ggaatgatcggaatgggaggacctttcgggatgatggcaggctccatgccacctccacct
cctttgtccaacattctgccggcaggtttccctggaccaagcgggccacctcccccacct
ccacttccgcccgctcagagccagccccagcagcagcagcagtctcctcaggcaccacag
caatcaccgacatcaactggattctttcaatcatcaggcatgagcttctttcctccggtg
caggtgcagcaatctccatctgcccaacgacagtga
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