Panicum virgatum (switchgrass): 120685374
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Entry
120685374 CDS
T07260
Name
(RefSeq) receptor protein kinase TMK1-like
KO
K00924
receptor protein kinase TMK [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120685374
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120685374
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120685374
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: TKL group
IRAK family
120685374
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_4
LRR_1
LRR_14
ABC1
LRR_Zer-1
LRR_NXF1-5
APH
ALKL1_2
PIP49_C
Kinase-like
Kdo
Motif
Other DBs
NCBI-GeneID:
120685374
NCBI-ProteinID:
XP_039823173
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Position
8N:complement(25815067..25821507)
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AA seq
907 aa
AA seq
DB search
MGRERFLLLPFLILAVAAPAATANTADAGVILELAKSLTNPPPSWTGTDVCGGATFQGIT
CDGGRVTGINLAKQHLSGTLPPSLSDLTALQWLQLQGNALEGNLPSLARMGSLETLALDG
NAFTALPPDFLEGLPSLQSLSMDDLPLKSWSIPNAVVGCTTLLNFSASNASVSGPFPAVL
ANLTSLRMLRLSYNYLTGGLPVVLEGLDSLESLQLNNQNSDEKLSGRIDVVAKLPSLKML
WLHSNKFTGPIPELSPDSQLVDFNVRDNSLTGVVPPSLIGIASLQYVKLSNNHLQGPKPK
FTANNTDIDSGNGFCLKDPGPCNPLVTILLEVASGFGYPLELAKWAGNDPCASGPWPGLT
CIKMDVTQINLARKNLSGLISPAFANLTRLQRLDLSNNQLTGAIPDALTTLANLNYLDLS
NNRLTGQVPEFKQPNIKLMTAGNRFGESDDDNGGGDGSNGGSSPSNPTGSRKLNAGMIIG
ILLAVILLVVCVVLFLHHRRKKNVDKFTPVSTKSPSGESEMMKIQVVGTNVNSNGSDSAI
PTELYSYVSADSKNTADIFESHGMQLPMSVVLKATNNFDEDYILGRGGFGVVFKGTLNGK
LVAVKRCDSGTMGTKGLQEFMAEIDVLRKVRHRHLVALLGYCTHGNERLLVYEYMSGGTL
REHLCDLQKSGYTPLTWTQRMTIALDVARGIEYLHGLAQETFIHRDLKPSNILLDQDFRA
KVSDFGLVKLAKDTDKSMMTRVAGTFGYLAPEYATTGKVTTKVDVYAYGVILMEMITGRK
VLDDSLPEDETHLVTIFRRNMLDKEKFKKFVDPTLELSAESWNSLLEVADLARHCTAREP
YQRPDMCHCVNRLSSLVDQWKPTNIDDDEGGTSEMGLHQQLERWRRDDFTISDSDSFSTY
SLSRKYH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggggagggagagatttctcctactccccttcctcatcctcgccgtcgccgcccccgca
gcgacggccaatacggccgatgcgggcgtcatcttggagctagccaagtcgctgaccaac
ccgccgccgtcctggaccggaaccgacgtctgcggcggcgccaccttccagggcatcacc
tgcgacggcggccgcgtcaccggcatcaacctcgccaagcagcatttatcgggcaccctc
cctccatccctctccgacctcaccgcgctccagtggctgcagctccagggcaacgcgctg
gagggcaatttgccctccctggcccggatgggctccctcgagaccctcgcgctcgacggt
aacgccttcaccgccctgccgccggatttcctcgaggggctcccctcgctgcaaagcctc
agcatggacgatctgcctctcaagtcgtggagcattcccaacgccgtcgtgggatgcacc
acgctgctgaacttctcggcttccaatgcctcggtctctggcccattcccggcggttctt
gccaacttgacatcgctccggatgctgcgtttgtcgtacaattaccttaccggtggcttg
ccagtggtgttagaggggttggactcgctggagtcgctgcaacttaacaaccagaattct
gatgagaaactgtcagggcggatcgatgttgtggcgaagttgccgagcttgaagatgctg
tggcttcattcaaacaagttcacgggcccgatcccagaattgagccctgattcacagctg
gttgatttcaatgtcagggacaacagtctcaccggagtggtaccaccctcgctgattggg
atcgcaagccttcagtatgtgaagctgtccaataaccatttgcaagggccaaagccaaaa
ttcacagctaacaatacagatattgattcggggaatgggttctgtctcaaggaccctggg
ccctgcaatccactggtgaccattctgcttgaggtggcttcagggtttggatacccactt
gaacttgcgaagtgggcaggaaatgatccgtgcgcaagtggtccatggcctggtcttacc
tgcataaaaatggatgtgactcaaatcaatttggctcgcaagaacttgtcagggttgatt
tcaccggcttttgcaaacctgactaggcttcaaaggctggatctgtcaaacaatcaactc
acaggggcaataccagatgctttgacaaccctggcaaacctcaattatcttgatctgtca
aataatcgtcttactggacaggtgcctgaatttaagcagccgaatataaagctgatgact
gcaggaaatcgatttggggaatcagatgatgataatggtggtggagatggttccaatggt
gggtcctcaccttcaaatcctacaggttcacggaagttgaatgcgggaatgatcattgga
attcttctagctgtcattcttcttgtagtttgtgttgtgcttttcctacatcatcgaagg
aagaagaacgtagacaagttcactcctgtctctactaagagcccttctggtgaatctgag
atgatgaagattcaggtggttgggacaaatgtcaatagtaatggaagtgattctgcaatc
ccaactgagctttacagttatgtgagcgctgatagtaaaaacactgctgatatcttcgag
tctcatgggatgcaattgcctatgagtgtggtactgaaggccacaaataattttgatgag
gattacatcttaggtagagggggcttcggggtggttttcaaggggactctcaatggaaag
cttgttgctgtgaagaggtgtgacagtggcactatggggactaaagggctgcaagaattc
atggctgagattgatgttcttaggaaagtgagacatcgacacttggttgcattgcttggg
tactgcacccatggaaatgagaggctcttggtctatgagtacatgtcgggaggaacattg
cgtgagcacctgtgtgatcttcagaagagtggttatacacctcttacatggactcagagg
atgacaatagctttggacgttgcccgaggaatagaatatttgcatggtttggcgcaggag
actttcatccatagggatctgaagccttctaacatattgctggaccaagattttagagct
aaggtttcagactttgggttggtcaagcttgctaaagatacggataagtccatgatgaca
agggtagcagggacatttggatacctcgcgcctgaatatgctactacaggaaaggtcaca
acaaaagtggatgtgtatgcttacggtgttatactaatggagatgattacgggaagaaaa
gtactggatgactcattacccgaggatgaaacacatcttgtaacgatcttccgaagaaac
atgcttgacaaagagaaattcaagaagtttgtggatcccactcttgaacttagtgctgaa
tcctggaacagcttgctggaggtagctgatcttgcacgccattgcacggcacgagaacca
taccagcggccggacatgtgtcactgtgtgaacagactttccagcctggtggatcaatgg
aagccaacgaatattgatgatgatgagggtgggacaagtgaaatgggtcttcatcagcag
ctagaaagatggagacgtgatgatttcactatatcagattcggattcatttagtacatac
agcttgtcaaggaagtaccattga
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