Panicum virgatum (switchgrass): 120685411
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Entry
120685411 CDS
T07260
Name
(RefSeq) cathepsin B-like protease 3 isoform X1
KO
K01363
cathepsin B [EC:
3.4.22.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120685411
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120685411
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120685411
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120685411
00536 Glycosaminoglycan binding proteins [BR:
pvir00536
]
120685411
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.1 cathepsin B
120685411
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C1: papain family
120685411
Chaperones and folding catalysts [BR:
pvir03110
]
Intramolecular chaperones
Papain family
120685411
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of microglial cells
120685411
Glycosaminoglycan binding proteins [BR:
pvir00536
]
Heparan sulfate / Heparin
Others
120685411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C1
Propeptide_C1
Motif
Other DBs
NCBI-GeneID:
120685411
NCBI-ProteinID:
XP_039823263
LinkDB
All DBs
Position
8N:complement(10505554..10509171)
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AA seq
402 aa
AA seq
DB search
MPGMSRSRGEGGAASKQQAAGRVGQLKRMVKSKKMGNTQQQLFVLFVVFLLSPVAPQELM
GVQVVRAVKPIPNSILGVEEGDNSRGIIQKDIIETVNNHPNAGWTAAHNPYFANYTIAQF
KRILGVKPTPQNVLTDVPTKTYSRSLKLPKEFDARSKWSHCSTIGNILDQGHCGSCWAFG
AVECLQDRFCIHMNMNISLSVNDLLACCGFMCGDGCDGGYPIMAWRYFVQNGVVTEECDP
YFDQVGCKHPGCEPAYPTPVCEKKCKVQNQVWAEKKHFSVNAYRINSNPDDIMAEVYENG
PVEVAFTVYEDFAHYKSGVYKHITGGMMGGHAVKLIGWGTSDAGEDYWLLANQWNRGWGD
DGYFKIIRGRNECGIEEDVVAGMPSTKNMVRNYGDSFGTAVV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgccggggatgagcaggagtcgcggggaaggaggagcagcaagcaagcaacaagctgca
gggagagtcggtcaactcaagaggatggtcaagagcaagaagatgggaaacacacagcag
cagctgttcgtactcttcgtagtcttcctcctatctccggtcgccccgcaggaacttatg
ggcgtgcaggtagtcagagcagtgaaaccaatcccaaattccattctcggggttgaggag
ggagacaattccagaggaatcatccagaaggacatcatagagacggtcaacaaccatccc
aatgctgggtggacggctgcacacaatccttactttgcaaactatactattgcacaattt
aaacgtatccttggagtgaagcctacaccacagaatgtgctgactgatgttcctaccaaa
acttattcaagatcactgaaacttccaaaggagttcgatgccagatctaagtggtctcat
tgcagcacaattgggaacatacttgatcaaggtcattgtggctcctgttgggcttttggt
gccgtggagtgcctccaggatcgtttttgcattcatatgaacatgaacatttcactatca
gtcaatgacctactggcatgctgtggttttatgtgcggtgatggttgtgatggaggctat
cctatcatggcatggcgctactttgttcaaaatggtgttgtcacagaggagtgcgatcca
tatttcgatcaggttggttgcaagcatcctggatgcgaacctgcttatcctacaccagtg
tgtgaaaagaaatgcaaggtgcagaaccaagtttgggcggaaaaaaagcatttcagtgtc
aatgcgtacagaataaattctaacccagatgacataatggcagaggtctacgaaaatggc
cctgtagaagttgctttcacagtttatgaggattttgcccactacaaatctggagtatac
aagcacattactggtggcatgatgggtggccatgccgtcaagttgattggatggggaacc
agtgatgctggagaggattactggcttcttgcaaatcagtggaacagaggctggggtgat
gacgggtacttcaagatcatacgaggcagaaacgaatgtggcatcgaagaggacgttgtt
gctggaatgccatccacaaagaatatggtcagaaactacggtgattcctttggaacagct
gtagtttga
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