Panicum virgatum (switchgrass): 120685435
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Entry
120685435 CDS
T07260
Name
(RefSeq) disease resistance protein RPM1-like isoform X1
KO
K13457
disease resistance protein RPM1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120685435
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
WH_DRP
Rx_N
LRR_8
LRR_4
AAA_22
LRR_At5g56370
AAA_16
NPHP3_N
AAA_18
LEDGF
Motif
Other DBs
NCBI-GeneID:
120685435
NCBI-ProteinID:
XP_039823293
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Position
8N:14437912..14450334
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AA seq
907 aa
AA seq
DB search
MAEAVLLAVTKIGSVLADEASTAILNKLSEKVNNLKELPGKIKQIGMQLKIMSNLIWQIG
TVYLTDEVVKSWIGEVRNVAYHVEDVMDRYSYHALQMEEEGFLKKFFIKGTHYVSVFSSI
ADEVCEIEKEIQQVIKMKDQWLQHAQLVPNQLVEMERQQSQGWFPEFVKDEDLVGIEENK
RWLTGWLYSEEPNSSVITISGMGGLGKSTLVTNVYEREKVNFPAHAWIVVSQIYSVDALL
RNLLRKIGTVGPPTPTGIDKMDVHDLKEEIKKQLQHRKCLIVLDDVWEQQVYFQIHDAFQ
NLQASIIVITTRKDHVGALASSNCHLELQPLARHDAFELFCRRAFYNKKGHECPMEFKEM
ATSIVDRCHGLPLAIVTIGSLLSSRPQIETWKHTYNQLQSELSKSDHVRAILNLSYHDLS
GDLRNCFLYCSLFPEDYAMSRESLVRMWVAEGFVLGKGKNTPEDVAEGNLMELIHRNMLE
AFEYDELGRVNTCKMHDIMRELALSVAKEEKFGSANDYGEMIQMDKDVRRLSLCGWKANT
PLKVKYPRLRTLVAHGMISSSTMLSSILTESSHLTVLELQDSDINEVPAFVGNLFNLRYI
GLRRTNVKSLPESIEKLSNLHTLDIKQTQIEKLPRGIVKIKKLRHLLADRFADEKQSEFR
YFIGVEAPKGLLNLEELQTLETVQASKDLAEQLKKLMQLRSIWIDSITAADCANLFATLS
TMPLLSSLLISARDVNETLCLQALDPISTNLHRLIVRGQWAAGTLEYPIFRNHGERLKYL
ALSWCQLGEDPLEVLAPHVPNLTYLSLNRVKSANTLVLSAKCFPHLKTLVLKRMPDVKQL
EIGDGALPCIEGLYIMSLAQLNKVPQGIESLLSLRKLWLLNLHSDFRSQWCKNGMHQKMP
HVPDIRI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcagtactccttgctgtcacaaagattggttctgttttggcagatgaagcc
tctacagccattctaaataagttgtctgaaaaagttaataatctgaaggaactgccgggg
aagatcaagcagatagggatgcaacttaagatcatgagcaatctgatatggcagattggc
acagtctacctcacagacgaagttgtcaagagttggattggggaggtccgtaatgtggct
taccatgttgaggatgtgatggacagatattcatatcatgctcttcaaatggaagaagaa
gggttcctgaagaagttcttcatcaagggaacccattatgtcagtgttttcagttcaatt
gcagatgaggtttgtgagatcgagaaggagattcagcaagttataaagatgaaagatcag
tggttgcaacacgcccagcttgttcctaaccaattggtggagatggaaaggcagcagtcc
caaggttggtttccggaatttgtcaaagatgaagacctagtgggaattgaggaaaacaag
agatggctgactggatggttgtattctgaagaaccaaacagttccgtgataacaatttct
ggtatgggtgggttgggaaaatctactctggtcacaaatgtttatgaacgtgaaaaggtc
aacttccctgcacatgcgtggattgttgtgtcacagatctattctgttgatgctctgttg
aggaatctacttaggaagatcggtacagtgggaccaccaacaccaacagggattgacaaa
atggatgtgcatgacttgaaagaagaaataaagaaacaactccaacatagaaaatgtttg
attgtattagatgatgtctgggagcaacaggtatacttccaaatacatgatgcttttcag
aatcttcaagcaagtataattgttattacgacacggaaggaccatgttggagctcttgct
tcttccaactgtcacctggaacttcaaccattggctagacatgatgcatttgaactcttc
tgcagaagggctttttacaacaagaagggccatgagtgccccatggagttcaaggaaatg
gccacttctatagtggataggtgtcatggccttcctctagcaattgttactataggcagc
ttgttgtcatcaagaccacaaatagaaacatggaaacatacatacaatcagcttcagagt
gagttatcaaaaagtgatcatgtccgggcaattttaaatttaagctaccatgacctgtca
ggagaccttaggaactgcttcttatactgcagcttgtttcctgaagactacgccatgtca
cgggaaagccttgtgcggatgtgggttgcagaaggctttgttcttggcaaaggaaagaac
acaccagaggatgtggctgagggaaatctcatggaattgatccaccgtaatatgctagaa
gcttttgagtatgatgagctcggcagggtcaacacctgtaagatgcatgatattatgcga
gaattggcactttctgttgccaaagaagaaaagtttggttctgcaaatgattatggtgaa
atgatacagatggataaagatgttcgccgcttgtcattatgtggatggaaagccaacact
ccactcaaagtaaaatatccacgtcttcggacccttgtggctcatggaatgatttcatcc
tctaccatgttatcctcaattttgactgaatcgagccacttgactgttctagagctgcaa
gattctgatatcaatgaggtgccagcatttgtagggaatctctttaatctacggtatatc
gggttaagacgcaccaatgtcaagtcactcccagaatccattgagaagctttctaacctc
cacactctggacatcaagcagacccagatagagaagcttcctcgaggcattgttaagatc
aagaagctgcggcaccttttggctgacagatttgctgatgagaagcagtcagaattcaga
tatttcatcggagtggaagcacctaaagggctgttgaatttggaagaactacagactctt
gagacagtgcaagcaagcaaagacttggctgagcagctaaagaaattgatgcagcttaga
agcatatggatcgacagtataactgctgctgattgtgcaaacctttttgcgaccctgtcg
acgatgccacttctttccagcctgcttatctctgcaagagatgtgaatgagacactttgc
ctccaagcccttgatccgatttccacaaatctccacaggctaattgtaagggggcagtgg
gctgctgggacattggagtatccaatatttcgtaaccatggggaacgtctcaaatatcta
gcactaagctggtgtcagcttggagaagatccattggaggtgcttgctccacacgtgcca
aacctcacctatttgagtcttaacagggtaaagagtgcaaacactttggttctttctgca
aagtgctttccacacctgaagacccttgtcttgaagcgaatgcctgatgtcaagcagctc
gagattggagatggcgctcttccatgcatcgaaggattgtacatcatgtcactggcgcaa
ctgaataaggtccctcaaggcattgaatccctactgtccctgaggaagctctggctgctg
aacctgcatagcgacttcagaagtcaatggtgcaagaatggaatgcaccagaagatgcca
catgttccagatattcgcatctag
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