Panicum virgatum (switchgrass): 120685461
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Entry
120685461 CDS
T07260
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120685461
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120685461
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120685461
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
FAR1_N
Prok-RING_1
zf-RING_Vps41
zf-RING_UBOX
zf_RING_Vps8_fungal
VPS18_RING_C
Prok-RING_4
zinc_ribbon_16
zf_RING_Vps8
zf-HC5HC2H_2
DUF8112
PHD_NSD
PHD
RINGv
Motif
Other DBs
NCBI-GeneID:
120685461
NCBI-ProteinID:
XP_039823340
LinkDB
All DBs
Position
2K:53701042..53704959
Genome browser
AA seq
339 aa
AA seq
DB search
MEDSKGSGGGGGGGGGGDKPSAELNPGSNPPPPAAAAAGAGDDGAAAAAAAAAADASRRP
FTALSQEEADLALARVLQEQERAYMLLRMNGGGGEGSDYGSSEAGSYEYDEEGEDDYEEE
LEHHLRVHHHEHPAGDADGEGEGAEGSEGAEGSDYDEEFEEDEEGEPEVDPADFEDDEAY
ARALQDAEEREVAARLMALAGLSDWRAVDVEHEEDHVNDPQEAWQEVDPDEYSYEELIAL
GEVVGTESRGLSADTLASLPSVKYKTQNVQDGNAEQCVICRVEFEEGESLIALPCKHSYH
PECINQWLQINKVCPMCSTEVSTSGNKEAEVSASGNKEA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaagattcgaaggggagcggcggcgggggcgggggcggcggcggcggcgataagccc
agcgccgagctcaaccccggttcgaatccgcccccacctgccgcggcggccgccggggcc
ggggacgatggtgccgccgcggccgcggccgcggctgcggccgacgcgtcgaggcggcct
ttcacggccctcagccaggaggaggctgacctcgccctcgcccgcgtcctgcaggagcag
gagcgggcgtacatgttgctacggatgaacggtggcggcggcgagggaagcgactacggg
agctccgaggccgggagctatgagtacgacgaggaaggcgaggacgactacgaggaggag
ctggagcaccacctccgcgtccaccaccacgagcaccccgcgggcgatgctgatggcgag
ggcgagggcgccgagggttccgagggtgccgaggggagcgactacgacgaggagttcgag
gaggatgaggaaggggagccggaggtagatcccgcggactttgaggacgatgaggcttac
gcgcgcgcgctgcaggatgctgaggagcgtgaggtcgctgcgcgacttatggctctcgct
ggtctcagcgattggcgagcagtggatgtggagcatgaggaggatcatgtaaatgatcca
caggaggcatggcaggaggttgatccagatgaatactcttatgaggagctaatcgcattg
ggtgaagtagttggtacagaaagcagaggtctctctgctgatacacttgcctctttacct
tcagtgaagtacaagacacaaaatgttcaggatggcaacgcagagcaatgtgtaatttgt
cgtgtggaatttgaggaaggtgaatctttgattgcacttccctgcaagcactcataccac
cctgaatgcataaaccagtggctgcaaataaataaggtatgccctatgtgcagcacagaa
gtttcaacctcgggcaacaaggaggcagaagtttcagcctcgggcaacaaggaagcgtga
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