KEGG   Panicum virgatum (switchgrass): 120685466
Entry
120685466         CDS       T07260                                 
Name
(RefSeq) receptor like protein kinase S.2-like isoform X1
  KO
K17302  coatomer subunit beta'
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120685466
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120685466
Membrane trafficking [BR:pvir04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    120685466
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   120685466
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR75_1st Beta-prop_EML EIF3I Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st ABC1 Motile_Sperm Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_LRRK2 WDR90_beta-prop_4th WD40_RFWD3 YukC Kinase-like WD40_like WDR54 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 120685466
NCBI-ProteinID: XP_039823342
LinkDB
Position
8N:complement(14338594..14375296)
AA seq 1154 aa
MDNVEAAFHRPYKFLKEITGGFSDECLLGSGTYGKVYKGKDKDGQEIAVKLLKSMDLDGN
EFARELNNLTKLKHPNIVRLVGFCDEEEKVVTDYNGKNIIATQMHRALCLEYLNNGSLQK
HLSDEHHVFDWQKRYKIIKGVCMGLKYLHEELESPVHHLDLKPDNILLDSNMEPKIADFG
LCRLLGEKTSKSTMSTVGTLGYCPPEFINNQIISKEFDIFSLGVIIIKIICGPAVHSPDD
GIRPIKFVRQVHKKWRGRLRAVPGHASLEADCQQVKKCIEIALKCTDKDRRRRPNIGYIV
DQLADTEIYKNDKAYLMDESQQGLVNTLTKELPATLMKEVNVNFVPEREFGRSAFGTDYK
EEVKQVVHQSSKQERLPRIGSTLPKDLPATFMKEITNGFSPDHELGRTAFGKFYKGVLPE
GGGGMIAVKRLSENASELQGTFAAEVTNLMGLMHENIAELVHYCHEAHKNVVQRNGRYVI
EDVIESCLCYEYLPNGSLDNHLYADTMSIIWDTRFKIIRGICQGIHFLHMDLVSGPLVHM
NLAPNSIWLDDNWVPKIADFGLSRLFGQEQTRMYTVNVKGYNGYMAPEYLYRGEISTMSD
IYSLGMLILEITTGEKNCGYSEDRSARNFVTNVHENWKTNEQIIHKYPSLDPNGLQQVRA
CIVIGLKCVEADRNKRPSIVDIVLKLNGKRVPMFEQISEGETKPLSNVLLDVYPAQLRIP
FKPDKLSSCPLRLTNVTDDYIAARLRAKNKRRYNSEMPLYAVVPPRATYTLVVTMREQKN
QSPLDTHELLSLESRIFHEGVGLENADLDSAAISFSNSFKESKELRAHKQEHEMTLSVAF
YSPEEATPDRNLWQPFWCGIEIIPNKNFSEVMSVDLHPTEPWILTSHKGGDIFIWDYKEL
EIESRFDFTQRPVYSAKFIERKEWFVAGDGDGFIYVYNYETDEKVTSIEAHEDKITSLAV
HPSDPIVISSSDDHLIKLWNWEKGWECARIFEGHSDRVTQVNINPINPNSFASASADCTI
KIWNIVSSESKITLSSEHQDRLLCVQNYTSYIHQYLITGSCDGTAHIWDLETETCVQTLK
GHTNRIGSVYRHPEIPVLITGSHDGTVRLWDCHTYRLENIIGVNLGAVYAFEYIKGSRRI
VIACHQGIAIMEMN
NT seq 3465 nt   +upstreamnt  +downstreamnt
atggataatgtggaggcggcattccataggccatacaaatttcttaaggaaattacaggt
ggtttttctgatgaatgtttgctcggcagtggcacatatggaaaggtttacaaggggaaa
gataaagatgggcaagaaattgctgtgaagctccttaagtccatggatcttgatggaaat
gaatttgctagagagttgaacaaccttactaagctgaagcatcccaatattgtccggttg
gtaggcttttgcgacgaagaagaaaaggtagttacagactataatggaaaaaatattatt
gccacacagatgcacagggccctctgccttgagtatctaaacaatggaagccttcagaag
cacctatctgacgaacatcatgtattcgattggcaaaaacggtacaaaataattaaaggt
gtctgtatgggtctgaaataccttcatgaggagctagagagtcctgtccaccatttggac
ctgaagcctgacaatatattgctagatagtaatatggagccaaaaattgctgattttggt
ttatgtagactccttggtgaaaaaaccagcaaaagtactatgagcactgtgggaacattg
ggatactgcccaccagaattcataaacaatcaaataatctcgaaagagttcgacattttt
agtttgggtgttataattataaagataatatgtggaccagcagtccactcccctgacgat
ggaatcagaccaatcaaatttgttaggcaggtgcacaaaaaatggaggggaagactacga
gcagtaccagggcatgcatcactcgaagcagactgccaacaagtaaagaaatgcatagag
atagcattaaagtgcacagacaaggacaggcgaagaaggcctaacattgggtacatcgtc
gaccaattagctgatacagaaatatataaaaatgacaaagcatatttgatggatgagagc
cagcagggactagtgaatacattaacgaaagaactacctgcgacccttatgaaggaagtt
aacgtcaattttgttccagagagagaatttggccgttctgcatttggaacagattacaag
gaagaggttaaacaggtggtacatcaatcatcaaaacaggaaaggctgccaagaattggg
agtacattaccgaaagacctaccagcgacctttatgaaggaaattaccaatggtttctct
cctgaccatgaacttggtcgaactgcttttggaaaattttataagggggttcttccagaa
gggggggggggcatgattgctgtgaagaggctttctgaaaacgcatcagagctacaagga
acgtttgcagctgaggttacaaaccttatgggacttatgcacgaaaatatagcagagctg
gttcactactgccatgaagcgcataagaatgtagttcagcgtaatgggagatatgtgatc
gaagacgtgattgaaagctgtctttgctacgaatatctacccaacggaagtcttgacaac
catctttatgcagacactatgtcaataatctgggacacacgattcaaaataataagggga
atctgccagggtatacatttccttcacatggatttggttagtgggccccttgttcatatg
aatctcgcgcctaactcaatatggttggatgataactgggtgccaaagattgctgatttt
ggtctctcaagactctttggccaagagcagaccaggatgtacacagtcaatgttaaggga
tataatgggtacatggctccagaatatctatacagaggtgaaatctccaccatgtcagac
atatatagtttaggcatgcttattcttgagatcacgactggagagaagaactgtggatat
tctgaagacagatctgcaagaaactttgttaccaatgtacatgaaaattggaaaacgaat
gagcaaataatacacaagtacccatcactagatccaaatggtctccagcaagtaagagca
tgcattgtaattgggctgaagtgtgtggaggctgatcggaacaaaaggccttccatagtt
gatattgttcttaagctcaatgggaaacgtgtaccgatgtttgagcagataagtgagggc
gagacaaaacctttgtccaatgtgctacttgacgtttaccctgcgcaacttcgcatcccc
ttcaagccagacaaattatcctcatgtccattgcgactaaccaacgttacagatgactac
atcgctgctagacttcgggcgaagaacaaaaggagatacaactcggagatgccactatat
gctgttgtgccgccgagggccacttacactctcgttgtgacaatgagagagcagaagaat
cagtctccgctggacactcacgaattgctttcgctggagagcagaatctttcatgagggt
gtgggcctagagaatgccgacctagactcagcagccatctcatttagcaactcttttaag
gaatccaaagagttacgggctcataagcaggagcatgagatgacgttgagtgttgctttt
tactcgcctgaagaggcaactcctgatcgaaatctatggcagccgttctggtgtggaatc
gagatcatacccaataagaatttttcagaggtgatgtccgtggacttgcatccgacggag
ccatggattttgacgagccataaagggggcgacattttcatttgggactacaaggaactg
gaaatagagagcagattcgacttcacacaaagaccagtttattcagctaaattcattgaa
cgaaaagaatggtttgtggctggtgatggtgatgggtttatctatgtgtacaactacgag
acagatgagaaggtcacaagcatcgaagctcatgaggataaaatcacgtccttggccgtg
catccctctgatcctattgtgatttcatcatccgacgaccacctgataaagctttggaac
tgggagaaaggctgggagtgtgctcgaatatttgaggggcattctgacagagtaacgcaa
gtaaacattaaccccataaatcccaacagtttcgccagtgcttccgcggactgcaccatc
aagatctggaatattgtatcttctgagagcaaaataactttatcgtccgaacatcaagac
agactgctttgtgttcaaaactacacaagttatattcatcagtatttgattaccggctct
tgtgatgggactgcacatatatgggacttggagacagaaacatgtgttcagacactcaaa
gggcacacgaaccgtattggttctgtctaccgtcatccagagatcccggtactaatcaca
ggttcgcatgatggaactgtgcgtctatgggactgccatacgtacaggcttgaaaatatt
attggagttaatcttggtgcagtttatgctttcgaatatataaaaggctccagaaggatt
gtcatcgcttgccaccaaggaattgcaattatggaaatgaattag

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