Panicum virgatum (switchgrass): 120685477 Help Entry 120685477         CDS       T07260                                  Name (RefSeq) clathrin heavy chain 1   KO K04646   clathrin heavy chain Organism pvir  Panicum virgatum (switchgrass) Pathway pvir04142   Lysosome pvir04144   Endocytosis pvir05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:pvir00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     120685477    04142 Lysosome     120685477  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     120685477  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pvir04131]     120685477   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pvir04147]     120685477 Membrane trafficking [BR:pvir04131]  Endocytosis   Clathrin-mediated endocytosis    Clathrin     120685477 Exosome [BR:pvir04147]  Exosomal proteins   Proteins found in most exosomes    120685477 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B IcmW Motif Other DBs NCBI-GeneID:  120685477 NCBI-ProteinID:  XP_039823360 LinkDB All DBs Position 8N:486007..496993 Genome browser AA seq 1710 aa AA seqDB search MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESEKYICVRETSPQNSVVIIDMAMPMQ PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI TPKLLGLVTQTSVYHWSIEGDSEPTKMFDRTANLANNQIINYRCDPAEKWLVLIGIAPGA PERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVVGNENPSTLICFASKTTNAGQITS KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQVSQKYGLIYVITKLGLLFVYDL ETAAAVYRNRISPDPIFLTAESSSTGGFYAINRRGQVLHATVNDATVVPFVSGQLNNLEL AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE INLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRALQHYSELPDIKRVIVNTHAI EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIVVQAAKEYSEQLGVDACIKLFEQFK SYEGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY VVERMDGDLWDKVLQPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEVAVEAQLYE EAFAIFKKFNLSVQAVNVLLDNIRSIERAEEFAFRVEEDAVWSQVAKAQLREGLVSEAIE SFIRADDAAHFLDVIRAAEEANVYNDLVKYLLMVRQKAREPKVDGELIFAYAKIDRLSDI EEFILMPNVANLQNVGDRLYDEELYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELIALMESG LGLERAHMGIFTELGVLYARYRSEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI QYDEFDNAATTIMNHSPDAWDHMQFKDVCVKVANVELYYKAVHFYLQEHPDLINDMLNVL ALRLDHTRVVDIMRKAGQLHIVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDM HDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD RELSEDLLVYFIEQEKKECFASCLFICYDLIRPDVALELAWMNNMVDFAFPYLLQFIREY TSKVDDLVKDKIESQNEERAKEKEEKDLVAQQNMYAQLLPLALPAPPMPGMGGPPPPMGG MGMPPMGGMGMPPMGPGPMPAFGMPPMGSY NT seq 5133 nt NT seq  +upstreamnt  +downstreamnt atggcggcggccaacgcccccatcgccatgcgcgaggccctcacgctcaccagcctgggc atcgccccgcagttcgtcaccttcacccatgtcaccatggagtcggagaagtacatctgc gtccgcgagacctccccgcagaacagcgtcgtcatcatcgacatggccatgcccatgcag ccgctccggcggcctatcaccgccgactcggcgctcatgaaccccaataccagaatcctc gcgctcaaagcccaaatacctgggacaacacaggatcaccttcaaatattcaatattgag gctaagactaagataaagtctcatcagatgccagagcaggttgtgttttggaaatggatc actcccaagttgttgggtttagtaacacaaacatcagtttatcactggtcaattgaaggt gattctgagcccaccaagatgtttgataggacagctaatctggcaaacaaccagatcatc aactaccgatgtgacccggctgagaagtggcttgtgcttattgggattgcacctggtgcc ccggagaggccacagctggtgaagggaaatatgcaacttttttctgttgatcagcagcgt agccaggcacttgaagcccatgcagcatcttttgcaacatttaaggttgttggtaatgag aacccatcaacccttatttgtttcgcctcgaagacaactaatgctggacagatcacttca aagttgcatgttattgaattgggcgcccagccagggaaacctggcttttctaagaaacaa gccgacctcttcttcccacctgatttccaggatgattttcctgtagctatgcaggtttca caaaagtatgggcttatctatgtaattacaaagcttggccttttgtttgtttatgatttg gaaactgcagcagcagtgtacagaaatagaattagtccagaccctatattcttgacagca gaatcttcctcgactggtggattttatgccatcaacagaagagggcaggttttacatgcc acagttaatgatgcaactgttgtgccttttgtcagtggtcaattaaacaatcttgagcta gctgtgaatcttgccaagagagccaatcttcctggtgcagagaacttggttgtgcaaaga ttccaggaactgtttgcacagacgaaatacaaggaagcagctgagctggccgcagaatct cctcaaggcctcctgagaacacctgagactgttgctaagtttcagagtgttcctgtgcaa gctgggcaaacacccccactgttgcagtactttggtacattgctaactcgtgggaagctc aacgcctttgagtctcttgagctatctcgacttgtcgtcaatcagaacaaaaagaacctt ctggaaaattggttggcagaagacaagctagagtgcagtgaagaacttggagatcttgtc aagactgtggacaatgatcttgccctaaaaatatacataaaggctagggcaacccctaaa gttgttgcagcttttgctgaaaggagggagtttgacaagattcttatatactcaaagcag gttgggtacactccagattatctcttccttctccagactattttgcgtacagatccacag ggagctgtgaactttgctctcatgatgtcacaaatggaaggtggttgtccggtagattat aatactattactgatcttttccttcagaggaatatgatacgggaggcaacagcttttttg ttggatgttctgaaaccaaacttgccagagcatgcttttcttcaaaccaaggttttggag ataaacttggtgacatacccaaatgttgctgatgccattcttgctaatggcatgttcagt cattacgaccgccctcgtattgctcagctgtgtgaaaaagcaggcttgtacttgcgtgct ctccagcattactcagagctacctgatatcaagcgtgtcatcgtcaatacccatgccatt gagccacaggcactcgttgagttctttggcaccctgtcaagagagtgggccttggagtgc atgaaggaccttctactggtcaatctgaggggaaatcttcaaatcgttgtgcaggctgca aaagaatactctgagcagctaggagttgatgcttgcataaaactatttgagcaatttaaa tcttacgagggcctttactttttcttgggatcctatttgagctccagcgaggacccagat atccatttcaaatacattgaagcagctgccaggactggacagatcaaagaagtggaacgt gtaaccagagagtccaacttctatgatgctgagaagacaaagaacttcttgatggaagca aagctacctgatgcccgcccactgattaatgtttgtgaccgctttggttttgtgccagat ctcactcactatctgtacacgaacaacatgcttcggtatatcgaaggctatgtacagaaa gtgaatcctgggaatgctcccttggtagtgggccaactacttgatgatgagtgccctgaa gattttattaagggtttgattctctctgttcgttccctccttcctgttgagccactggtt gatgaatgcgagaagaggaaccgcctacgtttgctcactcaattcttggagcacttagtg agcgaaggtagccaagatgtgcatgtccacaatgctcttgggaaaataatcattgacagc aacaataatcccgagcatttccttactaccaacccattttatgactcgcgtgttgtgggt aaatactgtgaaaagcgggatcctacacttgctgttgttgcttacaggcgtgggcagtgt gacgatgaacttattaacgtcactaacaaaaactcattgttcaagctgcaagccagatat gttgttgagagaatggatggtgatctgtgggataaagttcttcagcctgagaatgaatat agaaggcagctcattgaccaggtggtttcgactgcattacctgagagcaagagcccagag caagtgtctgctgctgttaaggctttcatgactgctgaccttcctcatgaattgattgag cttcttgaaaagattgttcttcagaattctgcgttcagtggaaatttcaatctgcagaac ctgctcatcttgactgcaatcaaggcggacccatcgagagtcatggactatgtgaacaga cttgacaactttgatgggcctgctgttggagaagttgctgttgaagcacaattgtatgaa gaggcttttgctatattcaagaagttcaacttaagtgtgcaggctgtcaatgttctcttg gacaacatccgaagcatagaaagagctgaggagtttgctttccgtgttgaagaagatgct gtttggagccaggttgccaaggcccagttacgtgaaggtttagtcagcgaagcaattgag tccttcatccgtgcagatgatgcggcacatttcctcgatgtcatccgtgctgcggaggaa gccaatgtgtacaatgatttggttaagtatcttctgatggtaaggcaaaaggcaagggag cccaaagttgatggagaactcatctttgcatatgctaagattgatagactcagtgatatt gaagagttcattcttatgccaaatgttgccaacctccaaaatgttggtgatcgtttgtat gatgaagagctatatgaagctgcaaagatcatctatgccttcatctcaaactgggctaag ctggctgttaccctggttaagctgaagcagttccaaggtgctgtggatgctgctcgtaag gctaacagcgcgaaaacatggaaagaggtctgctttgcttgtgttgatgcagaggagttc cgtcttgcacagatatgtggtctaaatattattgtccaggttgatgacttagaagaagtg agtgaatactaccagaatagaggatgcttcaatgaacttattgctctcatggagagtggt cttggacttgaacgtgcacacatgggcatcttcacagaactgggagttctgtatgctaga taccgatctgagaagcttatggagcacatcaaacttttctccacccgtctcaacattcct aagcttatccgggcttgcgatgaacagcaacactggaaagaacttacctacctgtacatt cagtatgatgaatttgacaatgctgccaccactatcatgaaccactctccagatgcatgg gatcatatgcagttcaaggatgtttgtgttaaagttgcaaatgttgaactgtattacaag gcagttcacttctatttgcaagagcaccctgatctcatcaatgatatgctaaatgtgctt gcgctccgtttggatcataccagagttgtagacataatgcgcaaggctggtcagctgcat attgtgaagccttatatggttgcagttcagagcaacaatgtctctgctgtgaatgaagca ttgaatgagctttatgttgaagaggaagactatgagagactccgggaatcagttgacatg cacgataactttgatcagataggtcttgcccagaagcttgagaaacatgaattgcttgag atgaggaggattgctgcctacatctacaaaaaggctggcagatggaagcaatccattgct ctatcaaagaaagacaacatgtacaaggattgcatggagacatgctcgcagtctggtgac cgcgaactatcagaggacttgcttgtctatttcatcgagcaggaaaagaaagaatgcttt gcatcttgcctcttcatttgttacgacttgattcggcctgatgttgcccttgagcttgca tggatgaacaacatggtggactttgccttcccatatctcttgcagttcattcgtgaatac accagcaaggttgatgatttagtcaaggacaaaattgagtcacaaaatgaggaaagagcc aaagagaaggaggagaaagatcttgttgcccagcagaacatgtatgcccagctgcttccg cttgctttgcccgctccgccgatgcctggcatgggtggacctccacctccgatgggtgga atgggcatgcctccaatgggtggaatgggtatgcctccgatgggtcctggtccgatgcca gcatttgggatgccaccaatgggaagctactag

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