Panicum virgatum (switchgrass): 120685487
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Entry
120685487 CDS
T07260
Name
(RefSeq) eukaryotic translation initiation factor 2 subunit gamma-like isoform X1
KO
K03242
translation initiation factor 2 subunit 3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120685487
Translation factors [BR:
pvir03012
]
Eukaryotic type
Initiation factors
eIF-2
120685487
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Gene cluster
GFIT
Motif
Pfam:
eIF2_C
GTP_EFTU
GTP_EFTU_D2
RsgA_GTPase
MMR_HSR1_Xtn
Dynamin_N
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
120685487
NCBI-ProteinID:
XP_039823376
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Position
8N:complement(6663750..6692512)
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AA seq
530 aa
AA seq
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MANASTVVHCLQTLCSISKLPTPTPAAAAAATQRVDPNPQPTPPPPPLNRVHAAAPGPGV
AQAEPKMARRGLMEQDLSTLDVFKLSPLSPEVISRQATINIGTIGHVAHGKSTVVKAISG
VQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDSPLCDVPGFENC
RMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRL
QHIIILQNKIDLIQESAAMNQHEAIQKFIQGTIAQGAPVVPISAQLKYNVDVICEYIVKK
IPIPERNFTSPPNMIVIRSFDVNKPGSEVDEIKGGVAGGSILKGVLRVNQKIEVRPGIVM
KDENGKIKCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVG
SLPDVYIELEVNFFLLRRLLGVRTSGTERASRVSKLAKGEILMLNIGSMSTGARVVAVKN
DLAKLQLTAPVCTSKGEKLALSRRIEKHWRLIGWGTIQAGTTLDVPPCLL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgccagcacagtagtccactgcctccaaaccctctgctccatctccaaactg
ccaactccgacgcccgccgccgccgccgccgcgacgcaacgcgtagatccaaacccccag
cccacgccacctccgccgccgctgaaccgcgtccacgcggccgccccaggccccggcgtt
gctcaagcagaaccgaagatggcgcgccgagggttgatggagcaggatctgagcacgctc
gacgttttcaagctgagccctctgtcgccggaggtgatttcgcgccaggcgacgatcaac
atcggtaccattgggcacgtggcccatgggaagtctacggttgtcaaagcaatctcaggt
gtacagacagttcgtttcaagaatgaactggagcgcaatatcactataaagcttggttat
gctaatgcaaaaatctataaatgtgaagatgatagatgcccacggccaatgtgctacaag
gcttatggcagtggcaaagaagatagtcctctctgtgacgttccagggtttgaaaactgc
aggatgaagctcttgagacatgtttcatttgttgattgcccggggcatgacattctcatg
gctacaatgcttaatggagcagctatcatggacggtgcactacttctgattgcagcaaac
gagagctgtccccaaccccagacatctgaacaccttgcagctgttgaaattatgcgcctt
caacatattatcattctgcagaacaaaattgatcttatccaggaaagtgcagcaatgaac
cagcatgaagcaatccagaaatttatacagggaacaatagctcaaggtgctcctgtggtg
ccaatatctgcacagctgaagtacaatgttgatgttatctgtgaatatatcgtgaaaaag
atccccatcccagagaggaacttcacctctccacccaatatgattgttattcgttctttt
gatgtgaacaaacctggttcggaggttgatgaaatcaagggtggagtagcaggtggcagt
atcctcaagggagtcctgagggtgaaccagaaaatcgaagttcgcccaggcatcgtgatg
aaggatgagaatggcaaaattaaatgcacacccatctattcgaggattgtgtccctgtat
gcagagcaaaatgaactccagtttgccgttcctggagggcttattggagttggaactacc
atggacccgacactgactcgtgcggataggctggtcggtcaggttcttggtgaagttgga
tcactccctgatgtttacattgagttagaggtgaacttcttcctcctaaggaggctgctg
ggggtgaggacaagtggaacagaaagggcaagcagggtctcaaagctcgccaagggtgag
atcctgatgcttaacattgggtcaatgtccactggagcccgtgttgttgctgtcaagaac
gatcttgcaaagctgcagctgaccgcaccggtgtgcactagcaagggtgagaagctggcc
cttagccggcgcatcgagaagcactggcgtctcattggttggggcacaatccaggccggc
actacacttgacgtccctccctgtctgctctga
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