Panicum virgatum (switchgrass): 120685496
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Entry
120685496 CDS
T07260
Name
(RefSeq) transcription factor TGAL4-like isoform X1
KO
K14431
transcription factor TGA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120685496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120685496
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120685496
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Ortholog
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GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
WHD_TANC1
Motif
Other DBs
NCBI-GeneID:
120685496
NCBI-ProteinID:
XP_039823386
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Position
8N:complement(2316436..2322016)
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AA seq
476 aa
AA seq
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MGETSSSSHSRQDPYALGYGFHGAIANSTPNFFDQEGATYFGELEEAFMHQVASLRRTQA
ATTSTAHHGDATPFSTATAATATARPPPTLDIFPAWPMRSLHTPKKGSNLTADSTEDSES
SSKNNSNHSSDQHGATENMVSQFDQGSQQQEIQHKNMATSYTTKSGKTLDPKTIRRLAQN
REAARKSRLRKKAYIQQLESSKLKLAQMEQDMQRPRSQGLFLGGTPGANTSSGAAMFDVE
YARWLDDHGRRMAELHGALQAHLPDSDLRAIVDDALTHHDELFQLKAMAAKSDVFHLITG
VWTTPAERCFLWMGGFRPSDLLKTLLPQLDPLTEQQLVGICNLQQSSQQAEEALSQGLEQ
LHQSLADTMAGGSLIDDANMSFMGQMALALGKLSNLEGFVIQADNLRQQTLHQMHRILTV
RQAARCFLAIGEYHNRLRALSSLWASRPREMLVTDEGNCGEISIAAQPSQSQFSAF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggagagactagtagttctagtcattcaaggcaggatccttatgctcttggctatggc
ttccatggtgccatcgccaactctactccaaatttctttgaccaagaaggagctacctat
tttggagagctggaagaggctttcatgcatcaggttgcctctctaagaagaactcaagct
gcaaccacctccacagctcatcatggagatgccacgcccttttccactgcaacagctgca
acggctacagctaggccacctcctacactggacatcttcccagcttggcctatgaggtct
cttcacacgcccaagaagggctcaaatttgacggcagacagcacagaggactcggagagc
agcagcaagaacaacagcaaccactcctccgaccagcacggagcaacagaaaacatggta
agccagttcgatcaaggttcacagcagcaggagattcagcacaagaacatggctacaagt
tacactacaaagtctggcaagactcttgatccaaagacaatcagaaggctggctcagaat
cgcgaagctgcacgcaaaagccggctgcgaaaaaaggcttatattcagcagcttgaaagt
agcaagctgaagcttgctcagatggaacaggacatgcagcgaccccgttcccagggcctc
tttcttggtggaactccaggtgcaaataccagctcaggcgccgcaatgttcgacgtggag
tatgcccggtggctggacgaccatggccggcgcatggccgagctgcacggagctctgcag
gctcacttgccggatagtgaccttagagccatcgtggacgacgccctgacccaccacgac
gagctgttccagcttaaggccatggcagccaagtccgatgtgttccacctcatcaccggg
gtgtggacgacccctgccgagcgatgcttcctctggatgggtggattcaggccctccgat
ctgctcaagacactgctgccccagctagatcccctgacagaacagcaactggtaggtatc
tgcaaccttcagcagtcatcacagcaggcagaggaagctctctcccagggcctggagcag
ctgcatcagtcactagctgataccatggccggtggatctctgatcgacgacgccaacatg
agcttcatgggtcaaatggcccttgcccttggcaagctgtccaaccttgaaggtttcgtg
atacaggctgataacttgaggcaacagactcttcatcagatgcacagaattctcacagtt
cgacaggctgctcgatgtttcttggccattggagagtaccacaaccgccttcgtgcctta
agctccctctgggcttctcggcctcgagagatgctagtgacagatgaaggcaattgtgga
gagataagcattgcggcacaaccatcccaaagtcaattttcagccttctga
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