KEGG   Panicum virgatum (switchgrass): 120685544
Entry
120685544         CDS       T07260                                 
Name
(RefSeq) transcription factor VIP1-like
  KO
K20557  transcription factor VIP1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    120685544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pvir03000]
    120685544
Transcription factors [BR:pvir03000]
 Eukaryotic type
  Basic leucine zipper (bZIP)
   Plant bZIP factors
    120685544
SSDB
Motif
Pfam: bZIP_1 bZIP_2 ATG16 ADIP NET2A bZIP_Maf GIT_CC SKA1 KASH_CCD UPF0242 CENP-H YabA SecD-TM1 Cnn_1N
Other DBs
NCBI-GeneID: 120685544
NCBI-ProteinID: XP_039823467
LinkDB
Position
8N:3102698..3120507
AA seq 323 aa
MDALLPPPAPSSAAFGGGGGVPARGHHRRAHSETFIRLPDADLLLDPDSDFGFSDIDFPS
LSDDSPAASDPTPRPQPQQPTPPAPPPPRPPSGAHMRSLSLDAAFFDGLSLQGGGGVAGH
KRSGSMDGATSPFEGESAPPGVLPDYAKKAVPAEKLAELALLDPKRAKRILANRQSAARS
KERKIKYTSELERKVQTLQTEATTLSAQLTLLQRDTSGLTTENRELKLRLQAMEEQAKLR
DALNDALREEVQRLKIAAGQVPNMNGNPFNGGLPQQQQQQQMASYFSQPQQMQYFGGHQG
QHHHRRNSSNGGGQSLSDSMDFM
NT seq 972 nt   +upstreamnt  +downstreamnt
atggacgcgttacttccccctccggcgccgtcctccgccgcgttcggcggcgggggcggg
gtccccgcgcgcgggcaccaccggcgcgcccactccgagaccttcatccgcctccccgac
gcggacctcctgctggacccggactccgacttcggcttctccgacatcgacttcccctcg
ctctccgacgactcccccgccgcgtccgacccgacgccgcggccccagccccagcagccc
acgccccccgcgccgccgccgccgcggccgccgagcggggcgcacatgaggagcctctcc
ctcgacgccgccttcttcgacggcctctcgctgcagggaggagggggcgtggcggggcac
aagcggagcggctccatggacggggccacctcgccgttcgagggcgagtccgcgccgccg
ggcgtgctcccggactacgccaagaaggccgtgcccgccgagaagctcgccgagctcgcg
ctcctcgaccccaagcgcgccaagaggatcctggcgaaccggcagtcggcggcgaggtcc
aaggagaggaagatcaagtacaccagtgagctcgagaggaaggtgcagacgctgcagacg
gaggccaccacgctctcagcacagctcacgcttcttcagagggatacctctggtttaacc
actgagaacagggagctcaaactccggttacaggccatggaagaacaagctaaacttcga
gatgctctgaatgatgccctgagagaagaagtccagcggcttaagatagccgctgggcaa
gtccctaacatgaacgggaaccccttcaacggaggactaccacagcagcagcagcagcag
cagatggcgtcctatttctcacaaccgcagcagatgcaatatttcggtggccaccagggc
cagcatcaccatcgccggaactcttcaaacggtggtggccagtccctgagcgactcgatg
gatttcatgtga

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