Panicum virgatum (switchgrass): 120685574
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Entry
120685574 CDS
T07260
Name
(RefSeq) proteasome subunit alpha type-7-B-like
KO
K02731
20S proteasome subunit alpha 4 [EC:
3.4.25.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120685574
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120685574
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120685574
03051 Proteasome [BR:
pvir03051
]
120685574
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
120685574
Peptidases and inhibitors [BR:
pvir01002
]
Threonine peptidases
Family T1: proteasome family
120685574
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
120685574
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
120685574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
120685574
NCBI-ProteinID:
XP_039823514
LinkDB
All DBs
Position
2K:53842706..53851902
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AA seq
249 aa
AA seq
DB search
MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSV
RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYISGLQQKYT
QSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE
TSGKETIKLAIRALLEVVESGGKNIEVAVMTKKDGLRELEEAEIDEYVAEIEAEKAAAEA
AKKGAPKDT
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcccgctacgaccgcgcgatcaccgtcttctcccccgacggccacctcttccaggtc
gagtacgccctcgaggccgtccgcaaggggaacgccgccgtcggcgtccgcggcaccgac
accgtcgtcctcggcgtcgagaagaagtccaccccaaagctccaggactccaggtccgtg
cgcaagatcgccagcctcgacacccacatcgcgctggcgtgcgcggggctcaaggcggac
gcgcgcgtgctcatcaaccgcgcgcgggtcgagtgccagagccaccggctcaccgtcgag
gaccccgtcaccgtcgagtacatcacccgctacatctccggcctgcagcagaagtacacg
cagagtggtggagtgcgccccttcgggctctccactctcatcgtcggcttcgacccctac
accgacaagccggccctgtaccagaccgacccatccggtaccttttctgcctggaaggcc
aacgccacggggaggaactccaactccatgagggagttcctcgagaagaactacaaggag
acctctggcaaggagactatcaagctcgccatccgtgcacttctagaggttgttgaaagt
ggtgggaagaacatcgaggttgcagtgatgacaaagaaggatggtctccgtgaacttgag
gaggctgagattgatgaatacgttgccgagattgaggcagagaaggctgcagctgaggct
gcaaagaagggtgccccgaaggacacctaa
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integrated database retrieval system
