Panicum virgatum (switchgrass): 120685578
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Entry
120685578 CDS
T07260
Name
(RefSeq) myb-related protein Hv1-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120685578
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120685578
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
120685578
NCBI-ProteinID:
XP_039823525
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Position
2K:complement(53863361..53864630)
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AA seq
245 aa
AA seq
DB search
MGRSPCCEKAHTNKGAWTKEEDDRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG
IDPVSHRPINEHASNITISFEAAAAAREEKGAVFRLEEPKAAAAIGRDQNPGGDWGHGKP
LKCPDLNLDLCISPPCQEEPLKPVKREAGLCFSCSLGLPKSAECKCSSFLGLRTAMLDFR
SLEMK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggggaggtcgccgtgctgcgagaaggcgcacaccaacaagggcgcgtggaccaaggag
gaggacgaccggctcgtggcgtacatcaaggcgcacggcgaggggtgctggcgctcgctg
cccaaggccgccggcctgctccgctgcggcaagagctgccgcctccggtggatcaactac
ctccggcccgacctcaagcgcggcaacttcacggaggaggaggacgagctcatcatcaag
ctccacagcctcctcggcaacaaatggtccctgatcgccgggaggctgccggggaggacg
gacaacgagatcaagaactactggaacacgcacatccggaggaagctgctgagccggggg
atcgacccggtgtcccaccggccgatcaacgagcacgcgtccaacataaccatatccttc
gaggcggcggcggcggcgcgcgaggagaagggcgccgtgttccggcttgaggagccgaag
gcggcagcggcgatcggccgcgaccagaaccccggcggcgactggggccacgggaagccg
ctcaagtgccccgacctgaacctggacctctgcatcagcccgccgtgccaggaggagccc
ctgaagccggtgaagcgggaggccgggctctgcttcagctgcagcctggggctccccaag
agcgccgagtgcaagtgcagcagcttcctggggctccggaccgccatgctcgacttcaga
agcctcgagatgaaatga
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