Panicum virgatum (switchgrass): 120685615
Help
Entry
120685615 CDS
T07260
Name
(RefSeq) transcription factor JAMYB-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120685615
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120685615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
120685615
NCBI-ProteinID:
XP_039823579
LinkDB
All DBs
Position
8N:complement(49677369..49679980)
Genome browser
AA seq
337 aa
AA seq
DB search
MEMVAVLQQRAGGGGARPAAATAPMTAAASSAKQEQEKEEGGSADAELRRGPWTVDEDLT
LINYIAEHGEGRWNALARAAGLKRTGKSCRLRWLNYLRPDVKRGDFTADEQLLILDLHSR
WGNRWSKIASHLPGRTDNEIKNYWRTRVQKHAKQLNCDVNSKRFKDAMRFLWMPRLAERA
AAAHHSSSASLQHQQQQAIISGDGLGALLPTAAAAAGCFEMATANAAADRSPCSVVTTTN
SSPCSSGTSSGSTAATTNDDDCWAAIQQDHEFWSAASNLQHLTAGSADQQLLYFPLAADL
PMQADLSGWVQGFSEGGSSSPETHQQLWSLDDIWRMH
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggagatggtagcagtgctgcagcagagggccggcggcggcggggcgaggccggctgcc
gccacggcgccgatgacggccgcggcgtcgtcggcgaagcaggagcaggagaaggaggag
ggcgggtcggcggacgcggagctccggcgcgggccgtggacggtggacgaggacctgacg
ctgatcaactacatcgccgagcacggcgagggccgctggaacgcgctcgcgcgcgccgcc
ggcctgaagcgcaccgggaagagctgccgtcttcgttggctcaactacctccggccggac
gtgaagcgcggcgacttcaccgccgacgagcagctgctcatcctcgacctccactccaga
tggggcaaccggtggtccaagatcgcgtcgcatctgccggggcggacggacaacgagatc
aagaactactggcggacgcgggtgcagaagcacgccaagcagctcaactgcgacgtcaac
agcaagcgcttcaaggacgccatgcgcttcctctggatgcccagactagcagagcgcgcc
gccgccgcccaccactcatcgtcggcgtccctgcagcatcagcagcagcaggccatcatc
tccggcgacggcctcggcgctctgctgcccacggccgccgccgccgccggctgcttcgag
atggcgaccgccaacgccgccgccgaccgctccccctgcagcgtggtcaccaccaccaac
agctcgccctgcagttctgggacgtcctccggctccaccgccgccaccaccaacgacgac
gactgctgggcggcgatccagcaggaccacgagttctggtccgccgcgtccaacctgcag
cacctcaccgccggcagcgccgaccagcagctgctgtacttcccgctggcggcggacctg
ccgatgcaggccgacctcagcggctgggtgcagggcttctccgagggcggctcttcttcg
ccggagacccaccagcagctctggagcctcgacgacatctggaggatgcactga
DBGET
integrated database retrieval system
