Panicum virgatum (switchgrass): 120685732
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Entry
120685732 CDS
T07260
Name
(RefSeq) TBC1 domain family member 13-like
KO
K24796
TBC1 domain family member 13
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120685732
Membrane trafficking [BR:
pvir04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120685732
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
120685732
NCBI-ProteinID:
XP_039823744
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All DBs
Position
8N:complement(29968856..29974268)
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AA seq
434 aa
AA seq
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MRKKGRAVPEWLNSPIWSAPPPAPAPPDPYGADLAPPLPLKPPPTPVLDTPVPPPPSYEQ
AVRGRERGDGEEEGGAGAAALRAHLLADFKAALSKKVVNMGELRRLACLGVPDGGAGVRP
VVWKLLLGYLPTDRGLWPYELEKKRNQYSAYKEEFLLNPSEKLRRIEESKLSRKKEINIE
RTGLLPRLKVTNEEHPLSSGKSSLWNQYFQESEILEQIDRDVKRTHPDLPFFSAKSNQES
LRRILIIFSKLNPSIRYVQGMNEVLAPLFYVFKNDPDPSSSASAEADTYFCFVELLSGFR
DNYCKHLDNSSVGIRSTLSKLSQLLKRHDEELWRHMEVTTKVYPQYYAFRWITLLLTMEF
SFNVCIHIWDALLGDPEGPPDTLMRVCCAMLILVRKRLLAGDFTANIQLLQHYPATNIDH
LLHIANRLRGTVAS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagaaggggagggcggtgccggagtggctcaacagcccgatttggtccgcgccc
ccgccggcgccggccccgccggacccctacggcgccgacctcgccccgccgctgcccctc
aagccccctccgaccccggtgttggacacgcccgtgccgccgccgccttcctacgagcag
gcagtgcgggggcgcgagcgaggggacggggaggaggagggcggcgccggggcggcggcc
ctgcgggcgcacctgctcgccgacttcaaggccgcgctgtcgaagaaggtggtgaacatg
ggggagctgcggcggctggcctgccttggcgtgcccgacggtggcgcgggcgtgcgaccg
gtcgtgtggaagcttctcttagggtatttgccaactgatcgtggtttatggccctacgag
ttagaaaagaagcggaaccaatatagtgcatacaaagaagagtttcttctaaatccttca
gaaaaactacggagaatcgaggaatcaaagctgtccagaaagaaagaaataaatattgag
aggactggcttgcttccaagattgaaggttactaatgaagagcatcctttaagctctggt
aaatctagcttatggaaccaatattttcaggagtcagagatattagaacaaatagatcga
gatgtaaagagaacacatccggatctgccatttttctctgctaagtcgaaccaggaatct
ctgaggcgtattctgattatcttttcaaaattgaaccccagcataagatacgtgcaagga
atgaatgaagttttggcacctctattctacgtattcaagaatgaccctgacccaagcagc
tcagcttcagctgaagcagacacatacttttgctttgttgagttgctgagtggttttaga
gacaattattgcaagcatcttgacaatagcagtgttggtattcgatctacactgtcaaag
ctgtcccaactcttgaagcgacatgatgaagagctatggcgtcacatggaggttactacc
aaggtgtacccacaatattatgcatttagatggatcacgttgctgttgacaatggagttc
agtttcaatgtatgtatacatatttgggatgctctcttgggcgatccggaaggcccaccg
gacacattgatgagggtatgctgtgccatgctcatcctagtccggaagcggctgttggct
ggagacttcactgccaatatccagttgctgcagcattacccagctactaacatcgatcat
ctcctccacatcgccaaccgattgagagggacagttgctagctag
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