Panicum virgatum (switchgrass): 120685733
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Entry
120685733 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 21-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120685733
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120685733
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120685733
NCBI-ProteinID:
XP_039823745
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Position
8N:complement(960722..964854)
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AA seq
629 aa
AA seq
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MHAAGLQGRGNLVRPPTSASQLPLPPAWAWHRHWHAPPTSATTPSLLLPQTNRSIPFIPC
HIDRCLLCIHPQIPSPPNNSSLRSAWIPLAGVACCRHAPPPKLALANMENSKSTSSSSSS
RGGEESNKVPLLQPRAADDHHGGSRSFISKDDDEQQVEEESSSLGRRAWEENKKLWVVAG
PSIFTRFSSFGLTVISQAFVGHIGSTELAAYALVSTVLMRFSNGILLGMASALETLCGQS
YGAKQYHMLGIYLQRSWIILFACSVVLLPVYLFTEPMLVALGQDPKISAVAGTISLWYIP
VMFSYVWSFTLQMYLQAQSKNMIITYLAMLNLALHLTLSWLMTVKFQLGLAGVMGSMIIA
MWIPVFGQLAFVFFGGCPLTWTGFSSAAFTDLGAIIKLSLSSGVMLCLELWYNTILVLLT
GYMKNAEVALDALSICLNINGWEMMISVGFLAATGVRVANELGAGSARRAKFAIYNVVIT
SFLIGFVLFVLFLFFRGSLAYIFTESRAVADAVADLSPLLAFSILLNSVQPVLSGVAVGA
GWQSVVAYVNITSYYLIGIPLGGVLGYVVGLHVKGIWIGMLLGTLVQTIVLLFITLKTDW
EKQVANAQEKLKRWYMEENRRLQGSRGNP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcagccgggctacaagggaggggcaatctcgtccgccctcccacctccgccagt
cagctacctctacctcccgcatgggcatggcatcggcattggcatgcgccccccacctca
gctaccaccccctccctgctgcttccacaaactaacaggagcatccctttcattccttgc
catatagatagatgcctgctctgcatccatcctcagatcccctcgcctcctaataatagt
agtcttcgatctgcttggattcctttagctggcgtagcttgttgcagacacgcaccacca
ccaaagctagctctagccaacatggagaacagcaagagcactagtagtagcagcagcagc
aggggaggagaggagtccaacaaggtgcccctgctccaaccgagagcggcagacgaccac
catggaggcagcagaagcttcatcagcaaggatgatgatgaacagcaggtggaagaagag
tcgtcgtcgctggggcggcgcgcgtgggaggagaacaagaagctgtgggtggtggcgggg
ccctcaatcttcacccgcttctcctccttcggcctcaccgtcatcagccaggccttcgtc
ggccacatcggctccaccgagctcgctgcatacgccctcgtctcaaccgtcctcatgcga
ttcagcaacggcatcctgctgggcatggcgagcgcgctggagacgctgtgcggccagtcc
tacggcgccaagcagtaccacatgctcggcatctacctgcagcgctcctggatcatcctc
ttcgcctgctccgtcgtcctgctccccgtctacctcttcaccgagcccatgctcgtcgcc
ctgggccaggaccccaagatctccgccgtcgccggcaccatctccctctggtacatccct
gtcatgttctcctacgtctggtccttcacgctccagatgtacctccaggcgcagagcaag
aacatgatcatcacctaccttgccatgctcaacctcgccctccatctcaccctctcctgg
ctcatgaccgtcaagttccagctcggcctggcaggggtcatgggctccatgatcatcgcc
atgtggatccccgtgtttggccagcttgcctttgtcttcttcgggggttgccctctcaca
tggaccgggttctcgtctgctgcgttcactgacctcggtgccatcatcaagctctcgcta
tcttctggtgtcatgctctgtttggaattgtggtacaacaccatattggtgctcctcaca
gggtatatgaagaatgcagaggttgcacttgacgccctttcaatatgccttaatatcaat
ggttgggagatgatgatttctgtcggatttttggctgcaacaggagtgcgagtggcaaat
gagcttggagctggaagtgcaagaagggccaagtttgcgatatacaatgtcgtcatcacg
tctttcttgatcggatttgtgttatttgtgctcttccttttcttccgtggaagccttgcc
tacatttttactgagagtcgagcagtggccgatgctgttgctgacctctcgcctctgcta
gccttctccatattgttaaacagtgttcaaccagtgctatcaggtgttgctgttggtgct
ggctggcaaagtgtagttgcctacgttaacattacatcatactacttgattggcatccct
cttggaggagtcctaggctatgtagtgggacttcatgtaaagggcatttggattggcatg
ctgctcggaacactggtccaaactattgtgcttctgttcataacattaaagaccgactgg
gaaaaacaggtggcgaatgctcaagagaaattgaagagatggtacatggaagagaacaga
aggctgcagggctcaaggggaaatccttga
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