Panicum virgatum (switchgrass): 120685740
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Entry
120685740 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 4
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120685740
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120685740
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120685740
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120685740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Spectrin
Motif
Other DBs
NCBI-GeneID:
120685740
NCBI-ProteinID:
XP_039823756
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All DBs
Position
8N:complement(42418858..42422459)
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AA seq
543 aa
AA seq
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MRAASGGREPSSSSAAVVALRALLIATACGLVFALLNLPDGRAGSAPPGGERGAGAGGGA
RLSVEQGLIREARRLNTIAEEIDGQSDESAAEEDERISKSPPDTKEKIWMMQDQLIMAKA
YLHFASPQGSAHLVRELKSRIKEIERAISHSSGGSHIPGSALQKMKAMEQTLSKAQRTYP
RCSQMTSKLRAMAHNSEELVRAHRSESSFLEQVAVRTLPKGHHCLAMRLTTEYFSLDPKE
RQFPKRDSRQLDGYYHYAIFSDNVLASAVVVNSTIAQSKDPGRIMLHIVTDALNCPAMMM
WFLTNPPTPAAVEVESLDDFKWLPGDFSSRFKLKGVRDPRYTSALNHLRFYLPEVFPSLS
KVLLLDHDVVIQTDLSELWGIDMKGKVIGAVETCSSGEGYHRLDNLVDFSNPTIVNKFDA
KACIFAFGMNIFDLNEWRKQGLTATYHTWFQVGKRQRLWKAGSLPLGQLVFYNQTLPLDR
RWHVLGLGHDFSIGRDELENAYVIHYSGKFKPWLEISIPKYRDNWNRHLNYDNAYLQQCN
IHG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagggcggcctccggcgggagggagccgtcgtcgtcgtccgcggcggtcgtcgcgctg
cgggcgctgctgatcgcgaccgcctgcggcctcgtcttcgcgctgctcaacctccccgac
ggccgcgccggctccgcgccccccggtggggagcgcggcgcgggtgcgggaggcggggcc
cgcctgtcggtggagcaggggctgatccgggaggccaggaggctcaacactatcgccgaa
gagatagatgggcaaagcgatgaaagtgctgctgaagaagatgaaagaatttcaaaatct
cccccggacactaaagagaagatatggatgatgcaagatcagctaattatggccaaggcg
tacttgcatttcgcttctccccaaggcagtgcacatttagttcgagagctgaaatcgagg
ataaaagagatcgagagggcaataagccactcaagtggaggttcccatatacctgggagt
gcattgcagaaaatgaaggccatggaacagaccctttccaaggctcagaggacctatcca
cgttgctctcagatgacatcaaagctacgtgcaatggcacacaacagtgaagaattagta
agagcacaccgaagtgaatcttcattccttgagcaggttgctgtgaggacattacccaaa
ggccatcactgcctagcaatgcgacttaccacagagtacttttcgttagatcctaaggaa
cgtcaattccctaaaagagacagcaggcagttagatggctattatcattatgcgatattc
tcagacaatgtacttgcaagcgctgtggttgtcaactctacaattgctcaatcaaaggat
cctggaaggataatgttacatattgtaactgatgcattgaattgtcctgcaatgatgatg
tggtttctgacaaacccaccaactccagcagcagtagaagttgaaagcctggatgatttc
aaatggttgcctggtgatttcagttctagatttaagctgaagggtgttcgagatccaaga
tacacttctgcacttaaccacttgcgtttttatttgccggaagtgtttccctctttgagc
aaggttctactcttggaccatgatgtggtaatccagacagatttgagtgaattatggggc
atagatatgaagggtaaagtaattggtgctgttgaaacatgctcttcaggtgaaggttac
catcgattggataaccttgttgatttttctaatccaactatcgtcaacaaatttgatgcc
aaggcttgtatctttgcttttggaatgaacatatttgacctgaatgaatggcgcaagcag
ggtttaactgcaacttatcatacatggtttcaagtgggcaaaaggcagaggttatggaag
gcaggaagcctgccactgggccaactcgtcttctacaaccaaacactgcctctcgaccgc
cgatggcatgttctcgggcttggccatgattttagcattggaagagacgagcttgagaat
gcctatgtcatccactacagtgggaaattcaaaccctggctggaaatctccatcccaaag
tacagagacaactggaatagacaccttaactacgataatgcatacttgcagcagtgtaac
atccacggatag
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