Panicum virgatum (switchgrass): 120685772
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Entry
120685772 CDS
T07260
Name
(RefSeq) ubiquitin-activating enzyme E1 2-like
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120685772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120685772
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120685772
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
120685772
Ubiquitin system [BR:
pvir04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
120685772
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120685772
Exosomal proteins of other body fluids (saliva and urine)
120685772
Exosomal proteins of colorectal cancer cells
120685772
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
UBA_E1_SCCH
E1_FCCH
E1_UFD
E1_4HB
BilD_C
Motif
Other DBs
NCBI-GeneID:
120685772
NCBI-ProteinID:
XP_039823793
LinkDB
All DBs
Position
8N:complement(520269..525844)
Genome browser
AA seq
1054 aa
AA seq
DB search
MLPQKRGVDAGEVQDLHNKAPRPAAPAPAQDHHKEDPAHMAARAPEIDEDLHSRQLAVYG
RETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGKVDLWDLSSNFFLSEKDI
GLNRAQACVPKLQELNNAVIISTITGDLTKEQLSNFQAVVFTDISIEKAVEFDDYCHSHQ
PPIAFIKSEVRGLFGSVFCDFGPEFTVLDVDGEEPHTGIVASISNDNPALVSCVDDERLE
FQDGDLVIFSEVHGMTELNDGKPRKIKSARPYSFTLEEDTTSYGTYIRGGIVTQVKPPKV
LKFKTLKEAIKEPGEFLMSDFSKFDRPLLLHLAFQALDKFRTELLRFPIAGSAEDAQKLI
DFAISINESLGESKLEEIDKKLLQHFASGSRAILNPMAAMFGGIVGQEVVKACSGKFHPL
YQFFYFDSVESLPIEPLEASDLKPENSRYDAQISVFGTKLQKKLEQSKIFMVGSGALGCE
FLKNLALMGISCSENGKLTVTDDDVIEKSNLSRQFLFRDWNIGQPKSTVAATAAMAINPK
LHVEALQNRASPETENVFNDAFWESLDAVVNALDNVTARMYIDSRCVYFQKPLLESGTLG
AKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPTE
VNVFLSNPSGYATAARTAGDAQARDQLERVIECLDRDKCDTFQDCITWARLKFEDYFANR
VKQLTFTFPEDAMTSSGTPFWSAPKRFPRPLEFSSSDPSHLNFLLAASILRAETFGIPIP
DWAKNPKKLAEAVDKVIVPDFQPKQGVKIETDEKSTSLSSASVDDAAVIEELIAKLEAIS
KTLPPGFHMNPIQFEKDDDTNFHMDLIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIA
TSTAMATGLVCLELYKVLAGGHKVEDYRNTFANLAIPLFSMAEPVPPKTIKHQDMAWTVW
DRWTITGNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFPRHKERLDKKVVDVAREVAK
VEVPSYRRHLDVVVACEDDDDIDVDIPLVSIYFR
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgcttccccagaagcggggggtcgacgccggcgaggtccaggacttgcacaacaaggcc
ccccgacccgccgcccccgcacccgcccaagaccaccacaaggaggacccagcccacatg
gccgccagggcgcccgagatcgatgaggacctccacagccgccagctcgccgtctacgga
cgcgagaccatgaagcgcctcttcggctccaacgtcctcgtctctggactacagggactc
ggcgcagagatcgcaaagaaccttgttcttgcgggtgtcaagtccgtaaccttgcatgat
gatggcaaagtggatctatgggatttatcaagcaacttcttcctctccgagaaggatatt
ggtctaaaccgtgctcaagcttgtgttccaaagcttcaagagcttaacaatgctgttatc
atctctaccattactggtgatttgaccaaggagcagctttctaactttcaggctgtggta
tttactgatatcagcatagaaaaagcagttgagtttgatgattactgtcatagccatcag
ccaccaatcgctttcattaagtcggaagttcgtggtcttttcggcagtgttttctgtgac
ttcggtcctgaatttactgtgttggatgttgatggtgaggagccacatacaggaatcgtg
gcatcaatcagcaatgacaacccagcacttgtttcttgtgtggatgatgagcgtctggag
ttccaggatggtgatctagttattttctctgaagtgcatggaatgactgagctcaacgat
ggaaaaccaagaaagattaagagtgctaggccttattcttttactctagaagaagacacc
acctcatatggcacttacattagaggtggtattgtcacacaagtgaagccacccaaggtt
cttaagttcaaaaccttgaaggaggcaatcaaggagccaggagaatttctcatgagtgat
ttctccaagttcgaccgcccacttcttttgcatttggccttccaagctctggacaagttt
aggactgagttgctgcgattccctattgccggttcagctgaggatgcacaaaagctgata
gattttgctattagtattaatgaaagtcttggtgaaagtaagcttgaagaaatcgacaaa
aagctcctgcagcattttgcaagtggttccagggctattttgaatccaatggctgcaatg
tttggtggtattgtaggtcaggaagttgttaaagcatgctcagggaaattccacccactt
tatcagttcttctactttgattctgttgaatcactgccaattgaaccgttggaggctagt
gatttgaagccggagaacagtagatatgatgcacaaattagtgtatttgggactaagctt
caaaaaaaactggagcagtccaaaatctttatggttggttctggggctcttggatgtgaa
tttttgaagaaccttgcattaatgggcatttcttgcagtgagaatgggaagctgactgtg
acagatgatgatgttatagaaaagagcaatctcagtcgccagtttctcttccgtgactgg
aacattgggcagcccaagtccacagttgctgctactgccgctatggcaattaatcctaag
cttcatgttgaggcccttcagaacagggcaagtcctgagactgaaaatgtgtttaatgac
gccttttgggagagcttggatgctgttgtcaatgccttggacaatgtgactgcaagaatg
tacattgactccagatgtgtatatttccagaagccacttcttgaatctgggactctgggt
gctaagtgcaacacgcagatggtcattcctcacctaacagaaaactatggggcatccaga
gatccaccagaaaagcaggcgccaatgtgcactgtacattcatttcctcataatattgat
cactgcctaacatgggcaaggtctgagtttgagggtctactggagaagactcccactgaa
gtaaacgtgttcctgtcgaatcctagtggatatgctactgctgcaagaactgctggtgat
gcgcaggctagggatcaacttgagcgggttattgagtgccttgacagagacaagtgtgac
acattccaagattgtattacctgggctcgccttaagtttgaggattatttcgccaatcgt
gtgaagcagctgacgttcaccttccctgaagatgcaatgacaagctctggtactcctttc
tggtctgctcctaagcggtttccgcgaccgctggagttctcatcttctgatccaagccac
ctcaactttctgttggctgcctcaatactaagggcggagacatttggaatacccatacct
gattgggccaaaaacccaaagaagctagctgaagctgttgacaaggtcatcgtacctgat
ttccaaccaaaacagggggttaaaatagagacagatgagaagtctactagcctatcctct
gcatccgttgatgatgctgctgtcattgaagagcttattgcaaagttggaagcaatttcc
aaaacattgccaccaggattccacatgaacccaatacagtttgagaaggatgatgacacc
aatttccatatggacttgatagctggctttgctaacatgcgggcaaggaactacagcatc
cctgaagttgacaagctaaaggcaaagttcatagctggaaggatcattccagccatcgcc
acctcgactgcaatggccactggccttgtctgcctggagctttacaaagtcctagctggg
ggtcacaaggttgaagactaccggaacacatttgcaaacctcgcaatccccctcttctcc
atggcagagcctgtgccacccaagaccatcaagcaccaggacatggcctggaccgtgtgg
gaccgctggactataactggcaacatcacgctgagggaactcctggagtggctcaaggag
aagggcttgaatgcatacagcatatcctgtggcacctcgcttctgtacaactccatgttc
cccaggcacaaggagcggctggacaagaaggtggtggatgtggctagggaggtggccaag
gtggaggtgccctcttatcgccgccatctggatgtcgtggtggcctgtgaggatgacgat
gacattgatgtggacattcctcttgtgtccatttacttccgttga
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