Panicum virgatum (switchgrass): 120685784
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Entry
120685784 CDS
T07260
Name
(RefSeq) GDP-mannose 3,5-epimerase 2-like
KO
K10046
GDP-D-mannose 3', 5'-epimerase [EC:
5.1.3.18
5.1.3.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00053
Ascorbate and aldarate metabolism
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
pvir01250
Biosynthesis of nucleotide sugars
Module
pvir_M00114
Ascorbate biosynthesis, plants, fructose-6P => ascorbate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
120685784
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120685784
Enzymes [BR:
pvir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.18 GDP-mannose 3,5-epimerase
120685784
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
NAD_binding_10
Polysacc_synt_2
RmlD_sub_bind
NmrA
Motif
Other DBs
NCBI-GeneID:
120685784
NCBI-ProteinID:
XP_039823807
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Position
8N:complement(42200481..42206056)
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AA seq
371 aa
AA seq
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MALNKEYMYAELEKEPYWPFEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHM
TEEMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN
MLEAARINGVKRFFYASSACIYPEFKQLETVVSLKESDAWPAEPQDAYGLEKLATEELCK
HYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTGRFEMWGDGLQTRSFT
FIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPGPEGVRGR
NSDNTLIKEKLGWAPTMELKDGLRITYFWIKEQLEREKAEGMDLSVYGSSKVVQTQAPVQ
LGSLRAADGKE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaacaaggagtacatgtacgccgagctggagaaggagccctactggccattt
gagaagctgcggatctccatcacaggcgccggtgggttcatcgcctcccacatcgcgagg
cgcctcaagagcgagggccactacatcatcgcctctgactggaagaagaacgagcacatg
actgaggagatgttctgccacgagttccacctcgtggacctgagggtcatggacaactgc
ctcaaagtgactacgggggtcgaccatgtgttcaacctcgctgctgatatgggtgggatg
gggttcatccagtccaaccactctgtgatcatgtacaacaataccatgatcagctttaac
atgcttgaggctgctagaattaacggcgtcaagaggttcttttatgcatcaagcgcctgt
atttatcctgaatttaagcagttggagactgtagttagcttaaaggagtcagatgcctgg
cctgcagagcctcaagatgcctatggcttggagaaacttgctactgaggaactttgcaag
cactacacaaaggattttggcattgagtgccggatcggtcgctttcacaacatatatggt
ccctttggaacatggaaaggtggaagggagaaggcacctgctgctttctgcagaaaggct
ttaacctccacagggcgctttgagatgtggggagatggtctgcaaaccagatccttcaca
tttattgatgaatgtgtcgagggtgtccttaggttaacaaagtctgatttccgtgagcct
gtaaacattggaagtgacgaaatggtcagtatgaatgagatggctgagatagtccttagc
tttgagaacaagcagctgcccatccaccacattcctgggccggagggtgtgcgtgggcgc
aactcagacaacacactcatcaaggagaagctaggctgggctccgaccatggagctgaag
gatggactgaggataacatacttctggatcaaggagcagcttgagagggagaaggctgag
ggcatggacctatcggtctacggatcatccaaggtcgtgcagactcaggcccctgttcag
cttggttccctccgcgctgccgatggtaaggagtga
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