Panicum virgatum (switchgrass): 120685797
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Entry
120685797 CDS
T07260
Name
(RefSeq) exocyst complex component SEC3A-like isoform X1
KO
K19983
exocyst complex component 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120685797
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Tethering complex
Exocyst complex
120685797
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Gene cluster
GFIT
Motif
Pfam:
Sec3_C-term
Sec3_CC
Sec3-PIP2_bind
Vps52_CC
Motif
Other DBs
NCBI-GeneID:
120685797
NCBI-ProteinID:
XP_039823821
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Position
8N:22282024..22309837
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AA seq
876 aa
AA seq
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MARSSADDMELKRGCEAGILAKGDRDKVVMTMRVAKGRGGWGKAGKLASRHMAKPRVLAI
TTKQKGQKTKAFMRVLKYSHGGVLEPAKVYKIKHLSKIEVVQNDPSGCTFLLGFDNLRSQ
SVAPPQWTMRNKEDRNRFLMCILNICKEHLGSIPKVVGMDVVEMAIWAKENTTTKVTQAT
NKDGPVESVVLESESNVTVEKDLVSQAEEEDIEALLSNYVMAIGEAEAFSERMKRELVAL
ESANVYALIETESVVEEVLQGLEIASVCVEDMDEWLGIFNIKLRHMREDIQSIEWRNNRL
ELQSDSNVALINELDKLLELLQIPPEYEASLTGGSFDEGNMIKNIEACDWLTLAIKNLEA
SNLDPIYVKLRAVREKRAEFVLLKCTFVRRASEFLRNYFPSLIDSMLNDKANFSQRGHLQ
RPDHADMRNKCRTYARLLQHIKSLDKSCMIPLRKAYCHSLNLLIRRESREFSNELRNSSK
ASKSSTPLFEGPAGANQPASITDSPADAYSKMITVFIPLLVDESSFLAHFMCFEVSTVSQ
SDANAEATSTSSVTLEASSSIGKTSNNPAELGLLNECLKELLDGIQEDFYALVDWAFKLD
PLSCISMHGITDRYLSGQKAEVSGYVQLLLDDLETRITILFSRFVDDACYQIEKYERNVR
QIGVVPYIPRFSQLAARMEQYINGSRDLVDQAYTKIVTIMFVILEKIAQVEPKYVDIVLL
ENYAAFQHSLYDLANVVPTLAKYYHQASEAYEQACSRHINLVIYIHFEKLFQFARRIEEL
MYNMSPEEIPFQVGMSKVDFRKMLKSSLAGLDKTINAMYRKLQKNMTAEELLPSLWEKCK
KEFLDKYATFLKLISKIYPDEKVTSVNEMRDILASL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtcgagcgcggacgacatggagctgaagcgggggtgcgaggccgggatccta
gcgaagggtgaccgggacaaggtggtgatgaccatgcgcgtcgccaagggccgcggcggc
tggggcaaggccggcaagctcgcctcccgccacatggccaagccccgcgtcctcgccatc
accaccaagcagaaagggcagaagaccaaggcgttcatgcgggtgctcaagtactcccat
ggcggcgtcctcgagcccgcaaaggtgtacaagatcaagcatctctccaagatcgaggtc
gtccaaaacgatcccagcggctgcaccttcctcttggggtttgacaacctgagaagccag
agcgtcgcgcctccgcaatggaccatgcgcaacaaagaggacaggaaccgttttctgatg
tgcatcctcaacatctgcaaagagcacttgggtagcatccccaaagtggtcggcatggat
gtcgtcgagatggctatctgggcaaaggaaaacactacaacaaaggttacacaagcgacc
aacaaagatggacctgtcgaatcagtggttttagagtctgaatcaaatgttacggttgag
aaggaccttgtttctcaggcagaagaggaggacatcgaggctcttcttagcaattacgtt
atggccattggtgaagcagaggctttttcagaaagaatgaagcgtgaacttgtagcttta
gaatctgcaaatgtttatgccctgatagaaactgaatctgttgtagaagaggtattgcag
ggtttagaaatagccagtgtatgtgttgaagatatggatgaatggctagggattttcaat
ataaagctgaggcatatgagggaggatatacaatctatagaatggcgtaataacaggctg
gagttgcaatccgacagtaatgtggctttgattaatgagcttgacaaattgcttgagctc
cttcagattccacctgaatatgaggcatcattaactggaggatcatttgatgagggaaat
atgattaagaacatcgaagcctgtgactggttaacccttgctataaagaacctagaagcg
tccaatctagatccaatctatgtaaaattacgtgctgttagagaaaaacgtgcagaattt
gttcttcttaagtgcacatttgttcggagggcatcagaatttttaaggaattactttccg
agtttaattgattctatgctaaatgacaaagcaaacttctctcagcgaggtcatctgcag
aggcctgaccatgctgatatgaggaacaaatgtaggacttatgcacggcttctacaacac
atcaagagtttggacaagagttgtatgatacctttgcggaaagcttactgccactcattg
aacttgctaattcgacgtgagtcccgtgaattttctaatgaactacgtaatagttcaaaa
gcatcaaagagcagcacaccattgtttgagggtcctgctggtgcaaaccagccagcaagt
atcaccgatagtcctgcagacgcatactccaagatgattactgtttttattccacttctt
gttgatgagagctcattccttgcacattttatgtgctttgaagtctctacagtttctcag
tcagatgctaatgctgaagcaactagtacttcttccgtcacattagaagcttcttcaagc
attggcaaaacaagtaataatccagctgagttgggattgctaaacgaatgtcttaaggaa
ttgcttgatggtattcaggaggacttttatgcattggttgactgggcattcaagctagat
ccactgagttgtatatcgatgcatggaataacagatcggtatctttctggtcagaaagca
gaggtctcaggatatgtgcaattgttgcttgatgacttggagacaagaataacgatttta
tttagcaggtttgttgatgatgcctgctaccagattgagaagtacgagcgcaatgtgcgg
caaattggagttgtgccctatattcccaggttctcacaacttgcagcacgtatggagcag
tatatcaatggatccagggatctagttgaccaggcatatactaaaattgtgactattatg
tttgtgatactggagaaaattgctcaagtggaacctaaatatgttgatattgtacttttg
gagaactatgcagcttttcagcacagcttgtatgatttggcaaatgttgtgccaacgctt
gctaaatattatcatcaagctagtgaagcctatgaacaagcttgttcacgtcacatcaat
ttggtcatatatattcactttgaaaaactattccagttcgctagaagaattgaggaacta
atgtacaacatgagccctgaagagatacctttccaagttggaatgtccaaggtagatttt
cgcaagatgttgaagtctagcttagctggacttgacaagacaataaatgcaatgtataga
aaactacagaagaatatgactgctgaggaattgcttccttcattatgggaaaaatgcaag
aaagagtttcttgacaaatatgcaaccttcctcaagttgatttcgaaaatatatcctgat
gaaaaagtgacatctgtgaacgaaatgagggatattctagcttctctgtag
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