Panicum virgatum (switchgrass): 120685804
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Entry
120685804 CDS
T07260
Name
(RefSeq) disease resistance protein RPM1-like
KO
K13457
disease resistance protein RPM1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120685804
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
WH_DRP
Rx_N
LRR_8
LRR_4
AAA_16
AAA_19
DO-GTPase2
ABC_tran
AAA_22
Motif
Other DBs
NCBI-GeneID:
120685804
NCBI-ProteinID:
XP_039823834
LinkDB
All DBs
Position
8N:15729594..15734370
Genome browser
AA seq
1033 aa
AA seq
DB search
MAEAALLALSKIGFYLAGEAATFIATQFSNLIELPNTVQRIRRELLMMNIFIRKTGTSYL
SDELLKAWITEVRMLAYRVEDIMDNFSYHSLQYKQEPKQKKLANGLSYGLVFSGIADDLA
QIEKEIEHVSKLKNMWVNSFHELLPSQVTSAEQQFPRYSSPQLIKNENLVGFKEDRELLQ
KLLTPNAPVHVANIPALKVVSLLGMGGMGKTTLLTSVYEQLKDHFDIHAWLTISQTYRGV
DALLKELLNNVSASKHTATADANNVNQKEVTVPVDIEIGDKKRLKPDDINKMDILELKRN
LKTVLKHKKYIVVLDDVWDRRVYDGISDVFEDSGKENRIVITTRKHDVAALATPGYLLKL
NPLDIKNALQLFCMKAFPNKNHFDWTSELLEHANDIIKSSGGLPLEKCPRELQELAIHIV
TKCEDSTLVMCPSELQELATDTVKKIKSLSLSVCTSELQDLATVIVKRCEDLPLVKCPSE
LQEITTDIVKKCRGLPLAIVSVGSLLSSRKQIEPVWRQMYNELPCELEKDDQVRGILNLS
YYDLPSDLRNCFLYCSLFPEDYHFSKEDLVRLWVAEGFVERKGDSTPEEVAEGYLAELIH
RNMLQLVENDELGRVNTCKMHDILRELALSISKVEMFGTVNDFGAMVQMDTGVRRISSYG
WKKMKKNKSNMKFPHLRTLMASDTIVDYVPSILSESKYLTVLELQNSDFQELPASIGNLF
NLKYIGLRNTRITSLPNSIKNLSNLQTLDVKSTSIKALPPGIVNLTKLRHLTADKLADKN
QSEFRYFVGVEAPKGLSNLEDLQTLETVQASKDLTEQLDKLLQLRSLWIDNITASHCGEL
FATLSTMPLLSSLLLSAGDENEILTLKDFNPICTKLHKLIVRGCWALGTKHCPILQNHGK
YLKYLALSRCHFVEDPLVVLASCVPNLTYLRLNNIHSPHTTLVLSAGSFPHLNTLVLKDM
NDVCLLTITDGALPGIECLYVTSLPQLQKVPQGIRYLGSLKKLWLLGLHRNFKAQWDIDG
MQKYLQHVPEIRV
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcagcacttcttgcactgtcaaagattgggttctatttagcaggagaagct
gccacattcattgcaacccagttttctaatttgattgagctaccaaacactgtgcagcgt
attcggagggaacttctgatgatgaacatctttatacggaagacaggtacatcatatctc
agtgatgagctcctcaaggcttggatcacagaagtgagaatgctggcctaccgtgttgaa
gacataatggacaacttttcctatcattctcttcaatacaagcaagaaccgaaacagaaa
aagttggctaacggattaagctatggtttagtgtttagtggaattgctgatgatctagct
cagattgaaaaggaaattgagcatgtctcgaagttgaagaatatgtgggtgaattcattc
cacgagcttcttccctctcaagtcaccagtgctgagcagcaattccctcgatacagttcg
ccccaacttataaagaatgaaaacctggtggggttcaaggaggacagagagctgttacag
aaattgttgactcccaatgcacctgtccacgtggcaaatataccagctctcaaggtggta
tctttgttaggtatgggtgggatgggaaagaccacactgctcacgagtgtgtatgaacaa
ctgaaagatcacttcgacatccatgcttggctcactatctcacagacatatagaggtgtg
gatgctctgctgaaggagctgctaaacaatgtcagtgcctctaagcatacagcaacagct
gatgctaacaatgtcaatcagaaggaagtgactgtaccagttgatattgagataggagac
aagaagaggctgaaaccagatgacatcaacaagatggacatcttagaattgaagagaaat
ttaaagaccgtactgaaacataagaaatatattgttgtattggatgatgtttgggatcgt
cgagtttacgatggaataagtgatgtgttcgaggattctgggaaggaaaaccgtattgtc
atcacaacaaggaaacatgatgtagctgctcttgccacaccaggttatctgctcaagcta
aacccattagacatcaagaatgcactccagctcttctgtatgaaggcttttcctaacaaa
aatcactttgattggacatcagagcttcttgagcatgctaatgacattataaagagttct
gggggtcttccattggaaaagtgtccacgtgagcttcaagagttggctattcatattgtg
acgaaatgtgaggactccacactggtaatgtgtccatctgaacttcaggagcttgctact
gatactgtaaagaaaattaagagcttgtcactgtcagtgtgcacatcggagcttcaggat
ctagctactgttattgtaaaacgatgtgaggatttacctctggtgaagtgtccatcagag
cttcaggagattactactgatattgtaaagaaatgtaggggtttgccactggctattgta
tcagtaggcagtttgttgtcttcaaggaagcaaatagaaccagtttggagacagatgtac
aatgagcttccttgtgaactggaaaaggatgatcaggttcgaggaattctgaatcttagc
tattatgacttgcctagtgacctccgaaactgcttcttgtactgcagcttgtttcctgaa
gattaccatttttcaaaggaggaccttgtgcgactttgggttgctgaaggatttgtcgaa
aggaaaggggacagcactcctgaggaggtagcagagggctatcttgcagagctgatccat
cggaatatgctgcaactagtggaaaatgatgagcttggaagggtgaatacatgcaaaatg
catgacattttaagggaattagccctttcaatctctaaagtggaaatgtttggcacagta
aatgattttggtgcaatggtgcagatggacacaggtgttcgtcgcatatcttcatatgga
tggaagaagatgaaaaagaataaatctaatatgaaatttccacacctccgaaccctgatg
gcaagtgataccattgtagactatgtaccatcaatactatctgaatccaagtaccttact
gtccttgaactgcagaactctgatttccaggaactgcctgcatctatagggaacctgttt
aacctgaaatacattggcctaagaaatacaagaataacatcactgccgaactccattaag
aatctctccaatcttcaaactcttgatgtcaaatcaacaagtataaaagctctgccacct
gggatagtgaatctcaccaaactaaggcaccttactgctgacaaacttgctgataagaac
cagtcagaattccggtactttgtcggagtggaagctcctaaagggctttccaaccttgaa
gatttgcagactcttgagaccgtgcaagcaagcaaggacctgacagagcaacttgataag
cttttgcaactaagaagcctatggatagataacatcactgcttcccattgtggtgagctt
tttgctaccttgtcgactatgccacttctttccagtttacttctatctgcgggtgatgag
aatgagatacttaccttgaaagatttcaatccgatctgcacgaagctccacaagctaatt
gtcagaggatgttgggccctagggacaaaacattgcccgatacttcagaaccatggcaaa
tatctcaagtatctggccctaagcaggtgccattttgtagaagatccactggtggttcta
gcatcttgtgttccgaacctcacgtacctgagacttaacaatatacatagtccacataca
acattggtactttcagcaggatccttcccacacctgaacacgctagttttgaaggacatg
aatgatgtctgccttctgacaattacagatggtgcacttcctggcatagaatgtctatat
gtcacatcattaccacaattgcagaaagttcctcagggcatcagataccttggctccttg
aaaaagctctggctgcttggtctccacaggaacttcaaagctcaatgggacatcgatgga
atgcagaagtacctacagcatgttccagagatacgggtctag
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integrated database retrieval system
