Panicum virgatum (switchgrass): 120685807
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Entry
120685807 CDS
T07260
Name
(RefSeq) phospholipase D delta-like
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00564
Glycerophospholipid metabolism
pvir00565
Ether lipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120685807
00565 Ether lipid metabolism
120685807
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120685807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120685807
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
120685807
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
120685807
Endosome - Golgi transport
Others
Others
120685807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
C2
PLDc
PLDc_2
Motif
Other DBs
NCBI-GeneID:
120685807
NCBI-ProteinID:
XP_039823843
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All DBs
Position
2K:54196019..54202672
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AA seq
857 aa
AA seq
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MASSSGGESPAKPVLLHGDLDLWILEARLLPNMDLFSEQVRRCFAACRPPTSCGPKQPPP
AARGASGGARQHHRKIITSDPYVTLSVSGAVVARTAVIPNCQEPVWEERFAVPLAHRAAA
LEFQVKDNDTFGAQLIGTVTVPADLVARGEEVEDWYPVIGTNGKPYKPDTALRLRFRFQH
IAENPAYRHGIPGDPEHSGIKDSYFPLRHGGQVTLYQDAHVKEGDLPEIELENGKMFEHN
ACWEDICHAILEAHHMIYIVGWSVYDKVRLVRERSPSRPLPEGGDLTLGDLLKFKSQEGV
RVCLLVWDDKTSHDKFFIKTGGVMATHDEETRKFFKHSSVICVLSPRYASNKLSIFKQQV
VGTLFTHHQKCVLVDTQAWGNKRKVTAFIGGLDLCDGRYDTPEHRLFKDLDTVFENDYHN
PTFSAGAKGPRQPWHDLHCRIDGPAAYDVLKNFEQRWRKATKWRDRFRSVSHWKDDALIK
LERISWILSPSRNVPNDHPTLWVSKEDDPENWHVQVFRSIDSGSLKGFPSDSKEASKLNL
VCRKNLVIDKSIHTAYVRAIRSAQHFIYIENQYFLGSSYAWPSYVNSGADNLIPIELALK
IASKIRAGERFAVYVVIPMWPEGVPTAASVQEILFFQAQTMEMMYKIIADELKAMDIKDL
HPQDYLNFFCLGNREEPTSNGSLESEKSSDKSAAALATKYRRFMIYVHAKGMIVDDEYVI
LGSANINQRSLAGSRDTEIAMGAYQPHYAWSTKNRHPHGQVYGYRTSLWAEHLGMVDDRF
KDPTSLDCVRFVNQIAEENWQRFTAEEMRTLQGHLLKYPVKVEDDGKIVSLPDQECFPDV
GGKILGAPTSLPDSLTM
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcgtccggcggcgagtctccggcgaagcccgtgctcctgcacggcgacctc
gacctctggatcctcgaggcgcgcctgctgcccaacatggacctcttctccgagcaagtc
cgccggtgcttcgccgcctgccgcccgcccacctcgtgcgggcccaagcagccgcccccc
gccgcgcgcggcgcctctggtggcgcccgccagcaccaccggaagatcatcaccagcgac
ccctacgtcacgctgtccgtgtccggcgccgtcgtcgcgcgcaccgccgtcattcccaac
tgccaggagcccgtctgggaggagcgcttcgccgtgccgctcgcgcaccgcgccgccgcg
ctcgagttccaggtcaaggacaacgacaccttcggcgcgcagctcatcggcaccgtcacc
gtgccggccgacctcgtcgccaggggcgaagaggtcgaggattggtaccccgtcatcggc
accaacggcaagccgtacaagcccgacaccgcgctgcgcctccgcttccgcttccagcac
atcgctgaaaacccggcataccggcacggcatccccggggaccccgagcacagcggcatc
aaggactcctacttcccgctccgccacgggggccaagtcacgctgtaccaggacgcgcac
gtcaaggaaggggatttgccggagattgagctcgagaacggtaagatgttcgagcacaac
gcgtgctgggaggacatctgccacgccatcctagaggcgcaccacatgatatacatcgtc
ggctggtcggtgtacgacaaggtgcggctcgtgcgcgagcggtcgccatcgcggccattg
cctgagggtggcgaccttaccctgggggacctgctcaagttcaagtcgcaggagggcgtc
agagtgtgcctgctcgtgtgggatgacaaaacttcacatgacaagtttttcatcaagacg
ggtggagttatggcaactcatgatgaagaaactcggaagtttttcaagcattcctcagtc
atatgtgttctttctcctcgatatgctagcaataagctgagcattttcaaacaacaggtt
gttggaactttgtttacacaccatcaaaaatgtgtgctggttgatacacaagcatgggga
aacaagcggaaagttacagctttcatcgggggcctagatctttgtgatggtcgctatgac
acgccggaacacaggcttttcaaagatcttgacacagtattcgaaaatgattatcataat
cctacattttcggcaggtgcaaagggacctagacaaccatggcatgatttacattgcagg
attgatggtcctgctgcctacgatgtcttgaaaaattttgaacagaggtggcgaaaggca
acaaaatggcgtgaccgttttaggagtgtatcccattggaaagatgatgctttaattaag
ctggagcgtatctcatggatactaagtccttcacgtaatgttccaaatgatcatcctact
ttgtgggtttcaaaagaagatgatcctgaaaattggcatgttcaggtattccggtcaatt
gactctggttcgctaaaaggatttcctagtgattccaaagaagcttcaaagctgaatctc
gtgtgccgcaagaacctggtaattgataagagcattcacactgcatatgtccgggcaatc
agatctgcacagcatttcatttatatcgagaatcaatactttcttggttcttcatatgct
tggccatcctatgtgaattcaggtgctgacaatctgataccaatagaattagccctcaaa
attgcaagtaagattagagcaggagaacgctttgcagtgtacgtagtgataccaatgtgg
cctgaaggagtccctactgcagcatctgtgcaagaaatccttttcttccaggcccagaca
atggagatgatgtataaaataattgcagatgaacttaaggcaatggacattaaggatttg
caccctcaagattacttgaacttcttttgtcttggaaatcgggaagaaccaacatcaaat
ggcagcctggagtcagagaaatcttcagataaaagtgcagcggccttagctacaaaatat
cggcggttcatgatctatgttcatgcaaaagggatgattgtggatgatgaatacgtcatt
ctgggttcggcaaacatcaaccagagatccctggcaggttctagagatactgaaattgca
atgggggcataccagcctcattacgcatggtctacaaagaatagacatcctcatggccag
gtatatggatacagaacgtctctctgggcagagcaccttggaatggttgatgatcgcttc
aaggatcctacgagtttggactgtgtaaggtttgtgaatcaaatagctgaagagaactgg
caaaggtttacagctgaagaaatgagaacactacaagggcacctcctcaagtacccagtc
aaggtggaggatgatggtaagatcgtctcactgccagaccaagaatgctttcctgacgtt
ggcggcaagattcttggagctccaacttcacttcctgattcgctaaccatgtag
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