Panicum virgatum (switchgrass): 120686014
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Entry
120686014 CDS
T07260
Name
(RefSeq) aspartic proteinase nepenthesin-1-like
KO
K22683
aspartyl protease family protein [EC:3.4.23.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120686014
Peptidases and inhibitors [BR:
pvir01002
]
Aspartic peptidases
Family A1: pepsin family
120686014
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Motif
Pfam:
TAXi_N
TAXi_C
Asp
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
120686014
NCBI-ProteinID:
XP_039824108
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Position
8N:complement(39507502..39508848)
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AA seq
448 aa
AA seq
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MVRSMGPIPMQVLTTLLLPLASLLSCSSAAAPPPSGYRFTLTHVDSKGGYTSAELLRRAA
HRSRHRAGMMLPGHSYSTMSSSSDTRPTRLRSGQAEYLMELAIGTPPVPFVALADTGSDL
TWTQCQPCKLCFAQDTPVYDPAASSSFSPATCASAACLPVWRRNCSAAAPCRYRYVYGDG
AYSAGVMGAETLTFGAGYGAAVSVGGIAFGCGVDNGGLSYNSTGTVGLGRGSLSLVAQLG
VGRFSYCLTDFFNTSLGSPVLFGSLAELAPGAAAAQSTPLVQNPRFPSWYFVSLEGISLG
GARLPIPNGTFDLRADGYGGMIVDSGTTFTVLVESAFRAVVGSVAGALGQPVANASSLDS
PCFSAPPGAQRLPDMPDMVLHFAGGADMRLRRDNYMSFNQEEAAFCLSIAGTASSVSVLG
NFQQQNIQMLYDITVGQLSFVPTDCSKL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggtcagatccatgggtcccattcccatgcaagtcctgacgaccttactcttgccactt
gcctcactgctcagctgctcatcggcggcggcgccgccgccgtccggctaccgcttcacg
ctcacccacgtcgactccaaaggtggctacaccagtgccgagctcctgcgccgcgccgcg
caccggagccgccaccgcgccggcatgatgctaccaggtcactcctactccacgatgtcc
tccagctcagacacccgtcccaccaggctccggtcgggccaggccgagtacctcatggag
ctcgccatcgggacgccgccggtgccgttcgtcgcgctcgccgacaccggcagcgacctc
acctggacgcagtgccagccctgcaagctctgcttcgcgcaggacacgccggtctacgac
cccgccgcctcgtccagcttctccccggcgacctgcgccagcgctgcgtgcctgcccgtg
tggcgccggaactgctccgccgccgcgccgtgcaggtaccgctacgtctacggcgacggc
gcctactccgccggcgtcatgggcgcggagacgctcaccttcggcgccggctacggcgcc
gccgtctccgtcggcggcatcgcgttcggctgcggcgtcgacaacggcggcctctcgtac
aactccaccggcacggtcggcctgggccgggggagcctgtcgctcgtggcgcagctcggg
gtcggcaggttctcctactgcctcaccgacttcttcaacaccagccttggcagcccggtc
ctgttcggctccctcgccgagctggcccccggcgccgccgcggcgcagtcgacgccgctc
gtgcagaacccccggttcccctcgtggtacttcgtctccctggagggcatctcgctcggc
ggcgcgcgcctgccgatcccgaacggcaccttcgaccttcgcgccgacggctacggtggg
atgatcgtggactccggcaccaccttcaccgtcctcgtcgagagcgccttcagggcggtc
gtcggcagcgtggccggcgcgctcggccagccggtggcgaacgcctccagcctggacagc
ccttgtttctcggccccgcccggcgcgcagcggctcccggacatgccggacatggtgcta
cacttcgccggcggtgcggacatgaggctgcgcagggacaactacatgtccttcaaccaa
gaggaggcggcgttctgcctgagcattgccgggacggcgtcgtcggtttccgtgctcggg
aacttccagcagcagaacattcagatgctgtatgacatcaccgtaggccagttgtcgttc
gttccaaccgactgtagtaagctctga
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