Panicum virgatum (switchgrass): 120686031
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Entry
120686031 CDS
T07260
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00061
Fatty acid biosynthesis
pvir00071
Fatty acid degradation
pvir01100
Metabolic pathways
pvir01212
Fatty acid metabolism
pvir04146
Peroxisome
Module
pvir_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120686031
00071 Fatty acid degradation
120686031
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120686031
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvir01004
]
120686031
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120686031
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120686031
Lipid biosynthesis proteins [BR:
pvir01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120686031
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast milk
120686031
Exosomal proteins of breast cancer cells
120686031
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pullulanase_Ins
Motif
Other DBs
NCBI-GeneID:
120686031
NCBI-ProteinID:
XP_039824123
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All DBs
Position
8N:5007435..5012661
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AA seq
697 aa
AA seq
DB search
MNPYFFGFLLPFVASLLLTKRKSEKKRGVPVDVGGEPGCAVRNHRFERPIETHWEGVSTL
AELFEQSCEQFAYMPLYGTRKLIARELEVAPDGRSFEKLHLGDYEWKSYADAFKTVCNFS
SGLLRTGHLKDEHVAIFADTRAEWQIALQACFRQNITVVTIYASLGEGALCHSLNETEVT
TVVCGRKELKKLVDISGQLDTVKHVIYINEEGVSTEVSLAEKCTSWTVKSFEEVESLGLE
RPVEASLPLPSDTAVVMYTSGSTGMPKGVMMSHRNVLAVVSAVTTIVPDLGKKDVYLAYL
PLAHILELAAEAIITGVGASIGYGSPLTLTDASNKIKKETKGDASVLKPTLMTAVPAILD
RVRDGVRKNVDAKGGLAKKLFDIAYSRRLAAVNGSWFGAWGLEKLLWDMLVFQKVRAILG
GRIRFILAGGAPLSGDTQRFINICLGAPISQGYGLTETCAGGTFSEYDETAVGRVGPPLP
CSYIKLIDWVEGGYLTTDSPMPRGEIVIGGPNVTKGYFKNEAKTNEVYKDDERGMRWFYS
GDIGRLHPDGCIEIIDRKKDIVKLQHGEYVSLGKVEAALSVCPYVDQIMIHADPFHSYCV
ALVVAVHSELKGWASKQGITYSDFAELCQKQETVKEVLQSLAKAAKQARLEKFEIPAKIK
LIPEPWTPESGLVTAALKLKREIIKKAYEKDLAQLYC
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgtatttctttggtttccttctcccttttgtcgcgtctctgctgctcaccaaa
aggaaatctgagaagaagaggggagtaccagtagatgtgggtggagagcccggctgcgcc
gtccgtaaccacagatttgaaaggcccatcgaaacgcactgggagggggtttccacgctt
gcggagctatttgagcaatcatgtgagcagttcgcctacatgcccctgtatggcaccagg
aagctaattgcaagggagttggaggtggctcccgatggaagatcctttgagaagctccat
ttgggagattatgagtggaaaagctatgctgatgcgttcaagactgtatgcaacttctcg
tctggcctactgagaactgggcacctcaaggatgagcatgttgctatatttgctgatact
cgggctgagtggcagattgcgttgcaggcgtgcttcagacaaaacattacagttgtcaca
atctatgcctctttgggggagggagcgctatgtcactcactaaatgagactgaggtaact
actgttgtctgcggacggaaagaactgaaaaagctggttgatataagtgggcaacttgat
actgtgaaacatgtcatctacattaatgaggaaggtgtctcaactgaagtatccttggct
gaaaaatgcactagctggactgttaagtcatttgaggaggtagagagcttaggactggaa
aggcctgttgaagcaagcttacctctcccatcagatacggcagtggttatgtatacaagt
ggcagcacagggatgcctaagggagtcatgatgagccaccgcaatgtcttggctgtagtt
tcagctgttacaaccattgtgcctgatcttggcaagaaggatgtgtacctggcgtacctt
ccgctagcacatatccttgaattggcagctgaggcaatcataactggtgttggggcttca
ataggatatggatcacctttgaccctgactgatgcatccaataaaataaaaaaggagaca
aaaggtgatgcttctgtactgaagccaacactaatgactgctgtgcctgctatacttgat
cgtgttcgtgatggtgtacgaaagaatgtagatgcaaagggtgggttagcaaagaaacta
tttgatattgcctacagccgccgtctagctgctgttaatggaagctggttcggtgcgtgg
ggactagagaagctcttgtgggatatgcttgtctttcagaaggttcgtgcaatcttggga
ggaaggattcgctttatccttgcagggggcgcacctttgtcaggggacacgcagagattt
atcaacatatgtcttggggctccaatatcgcaaggatatggcctgactgaaacttgtgct
ggtggaacattttcagagtatgatgaaacggctgttggccgtgttggtcctcctctgcct
tgttcatacattaagttgatagactgggtcgaaggtggatacttaacaactgattcacca
atgcctcggggtgaaatagttattggaggtccaaatgtaactaaaggctacttcaaaaat
gaagcaaaaacaaatgaagtctacaaggatgatgaaagaggcatgcggtggttctactct
ggtgacattgggcgcctgcacccagatggctgtattgaaatcattgaccgtaagaaggac
attgtcaaacttcagcacggtgaatatgtatctctaggaaaggtggaggcagctttgagt
gtgtgcccatatgttgaccagatcatgatccatgctgaccccttccacagctactgtgtc
gcgcttgttgtagctgtacacagcgagctgaaaggctgggcctcaaaacaaggaatcaca
tatagtgattttgcagagttgtgtcagaagcaagagactgtcaaagaagtactccaatct
ttggcaaaggctgctaagcaagcgcgactggagaagtttgagatcccagccaaaatcaag
ctcataccagagccatggacgccggagtcaggcctcgttacggccgccctcaagctcaaa
agggagatcatcaagaaggcatacgagaaggaccttgctcagttgtactgctag
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