Panicum virgatum (switchgrass): 120686043
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Entry
120686043 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120686043
KO
K13130
gem associated protein 2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120686043
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
120686043
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Gene cluster
GFIT
Motif
Pfam:
SIP1
Motif
Other DBs
NCBI-GeneID:
120686043
NCBI-ProteinID:
XP_039824134
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Position
8N:22952284..22956571
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AA seq
383 aa
AA seq
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MAAAAAGAAHEGSARRKRAYARPELEALRGAPSEEAQVRLWANVRAALAAAGFSGEYDGL
LVAEDEEPRSRRGSKGRKAAGGGGAGAGRKWGEERAAAAPRLSGVLEIGAWRNGDLGVSH
EHFFEAGAHDPGVAYGLVEEQGEDVECEDDSDDDYEGILKPAFAVDGDPDFQSGEPLDGF
EYLRRVRWEARQIPRVKVAKVDLSAARKEQTPYMPEIPDIPMCLPDLRASKQWEDAFLTH
FSETRLVFSELVSSDEPSVSGGMKNYTKPVSSKESQTEPTLTMLRNMDAVARAATLRSYI
DMIQSLDSLSRNNCLWLFALCVAVDAPLDAETCASLRSLLRKCATILITKSEMDDEVVML
NILMAISGVGEGRAWCSGRAYRL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgcagccggggcggcccacgagggatccgcgcgcaggaagagagcgtac
gcgaggccggagctcgaggcgctcaggggcgccccgtcggaggaggcgcaggtgcggttg
tgggccaatgtccgcgccgccctcgccgctgccggcttctccggcgagtacgacggtctc
ctcgtcgctgaagacgaggagcctcggagcaggagggggagcaaggggaggaaggccgcg
ggcgggggaggcgctggggccgggaggaagtggggcgaagagagggcggcggcggcgccc
cggttgtctggtgtgctcgagattggtgcgtggagaaatggggatttgggggtttctcac
gagcacttcttcgaggctggtgctcacgaccctggtgtggcgtatggattagttgaagag
cagggtgaagatgtggagtgtgaagatgacagcgatgatgactatgagggcattttgaag
cctgcatttgcggtggacggggatcctgatttccagtctggagagcctcttgacggtttt
gagtatcttcggcgtgtcaggtgggaggctaggcaaatccctagagtgaaggtagccaag
gtggatttgagtgcagctagaaaggagcaaaccccttatatgccggaaattcctgacata
cccatgtgcttacctgatttgcgcgcatcaaagcaatgggaagatgcatttcttacccat
ttttctgagaccagactggtgttctccgagcttgtcagctctgatgagccatctgtatct
ggtggaatgaaaaactacacgaaacctgtaagcagcaaggaatcacagactgaaccaaca
ctgacaatgcttcgcaacatggatgcagttgcgagagctgcgacgctaaggagctacata
gatatgatccagagtttggactcgctctcaaggaataactgcctgtggctttttgcactc
tgtgtagccgtggatgctcccttggatgcagagacatgtgcctccctaaggtccttgctg
cgcaagtgcgcaaccatccttatcacaaagtcggagatggacgatgaggttgtaatgctg
aatatactgatggcaatatctggagtcggagaagggcgggcctggtgcagcggtagagcc
taccgtctgtaa
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