Panicum virgatum (switchgrass): 120686167
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Entry
120686167 CDS
T07260
Name
(RefSeq) T-complex protein 1 subunit theta-like
KO
K09500
T-complex protein 1 subunit theta
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120686167
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120686167
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP60 / Chaperonin
120686167
Cilium and associated proteins [BR:
pvir03037
]
Primary cilia and associated proteins
BBS-CCT complex
120686167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120686167
NCBI-ProteinID:
XP_039824268
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All DBs
Position
8N:complement(41231350..41236621)
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AA seq
548 aa
AA seq
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MVGLGAMPGYGIQSMLKEGHRHLSGLEEAVLKNIDACGELSAITRTSLGPNGMNKMVINH
LDKLFVTNDAATIVNELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLQKAGELI
RMGLHPSEIIIGYTKAINKTIEILEDLVEKGSENMDVRNKEEVVLRMRSAVASKQFGQED
ILCPLVADACMQVCPKNPANFNVDNVRVAKLVGGGLRNSTVVRGMVLKNDAVGSIKRVEK
AKIAVFAGGVDTSATETKGTVLIHSAEQLENYAKTEEAKVEELIKAVADSGAKVIVSGAA
VGDMALHFCERYKLMVLKISSKFELRRFCRTTGAVAILKLSQPNVDELGYADSVSVEEIG
GARVTVVKNEEGGNSVATVVLRGSTDSILDDLERAVDDGVNTYKSMCRDSRIIPGAAATE
IELAKRLKEFSLKETGLDQYAIAKFAESFEMVPRTLSENAGLNAMEIISSLYAEHAAGNT
KVGIDLEEGVCKDVSVLKIWDLYVTKFFALKYSADAVCTVLRVDQIIMAKPAGGPRRDAQ
PGGGMDED
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggtggggctgggcgcgatgccggggtacgggatccagtcgatgctcaaggagggccac
cgccacctctccgggctcgaggaggccgtgctcaagaacatcgacgcctgcggcgagctc
tccgccatcacgcgcacttccctcggacccaacggaatgaacaaaatggttattaatcac
ttggacaagctgttcgtgacaaatgatgctgccaccatcgtgaacgagctcgaggttcag
cacccggctgctaagatcctggtactagctggcagggcacagcaggaggagattggggat
ggggctaatctcaccatatcgttcgccggtgaactgcttcagaaggcaggggagctcatc
aggatgggcttgcatccgagcgagatcatcattggctacaccaaggccatcaacaagact
attgagatcttggaggaccttgtcgagaaaggctcagagaacatggatgtaagaaataag
gaggaggttgtgttgaggatgagatcagctgttgcgagcaagcaatttggccaggaggat
attctgtgccctcttgtggctgatgcctgcatgcaagtttgccccaaaaatcctgcaaac
ttcaatgtcgacaatgttagagtggctaagctggttggaggtggtttgcgcaattctact
gttgtccgcgggatggttctaaaaaatgatgccgttgggagcatcaaaagggtggaaaag
gcaaagattgcagtatttgctggtggcgttgatacttctgcaactgaaacaaagggaact
gtgttgatacattccgctgagcagctagaaaattatgctaagaccgaggaagctaaggtg
gaggagcttatcaaagctgttgctgactcaggtgccaaggttattgtcagtggggcagca
gttggtgatatggcgctacatttctgtgaacgttacaaactaatggttttgaaaatcagc
tcaaagtttgaattgagaagattctgccgtactactggggctgttgcaattttgaaactt
agccaaccaaatgtggacgaattaggatatgcagactctgtttcggtggaggaaattggt
ggtgctcgagtgactgttgtcaagaatgaggaaggtggaaattctgtggctactgttgtc
ttgaggggcagtactgacagtatactagatgatcttgaaagagctgtcgatgatggtgtc
aatacttacaagtcaatgtgcagggacagtcggataattcctggtgcagctgcgacggaa
atagaactggcaaagagattgaaggagttttctttgaaggaaacagggttggaccagtac
gccattgcaaaatttgctgaaagttttgaaatggttccaagaaccctatctgaaaacgct
ggacttaacgcaatggagataatatcatctctttatgctgagcatgctgctgggaataca
aaagttggcattgacctggaggaaggtgtttgcaaggatgtctctgtcttgaaaatatgg
gacctctacgtcacgaagttttttgccctaaaatactctgctgatgctgtatgcaccgta
ctacgggttgaccagatcatcatggcaaagccagcaggagggccaaggagagatgcccag
cctggtggtgggatggatgaggattag
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