Panicum virgatum (switchgrass): 120686231
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Entry
120686231 CDS
T07260
Name
(RefSeq) HMG1/2-like protein isoform X1
KO
K25507
high mobility group B protein, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120686231
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
120686231
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Protamine_like
YABBY
MlaC
Motif
Other DBs
NCBI-GeneID:
120686231
NCBI-ProteinID:
XP_039824349
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Position
2K:54892662..54894750
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AA seq
126 aa
AA seq
DB search
MKSRARSSGADSRLSVRKSKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIG
KAGGDKWKSLSDAEKSPFVSKAEKLKAEYNKKMDAYNNKTAGGPTASGDSDKSKSEVNDE
DEEGDE
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgagggcgaggtccagcggagccgactccaggctctccgtgaggaagtccaag
gccgagaaggaccccaacaagcccaagaggcctccgagcgccttcttcgtcttcatggag
gagttcaggaaggactacaaggagaagcaccccaatgtcaagcaagtctccgtgattggc
aaggctggtggggacaagtggaagtccctgtccgatgctgaaaaatctcccttcgtgtcc
aaggccgagaagctcaaggctgagtacaacaagaagatggacgcctacaataacaagacg
gctggaggccctacagcttctggtgactctgacaagtccaagtccgaggtgaacgatgag
gatgaggagggtgacgagtga
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