Panicum virgatum (switchgrass): 120686349
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Entry
120686349 CDS
T07260
Name
(RefSeq) regulatory-associated protein of TOR 1-like isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120686349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120686349
Membrane trafficking [BR:
pvir04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
120686349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_EML
WDR90_beta-prop_4th
Peptidase_C14
Beta-prop_WDR75_1st
Lgl_C
Motif
Other DBs
NCBI-GeneID:
120686349
NCBI-ProteinID:
XP_039824481
LinkDB
All DBs
Position
8N:complement(696898..706653)
Genome browser
AA seq
1387 aa
AA seq
DB search
MALGDLMASRLVHSSSSPSPSPSTAAPPAPLPNHHHNHVTDDLPVANGPEPRNGLEPAEV
EKPASVAYPPQVVVLCEQRHEGIDEAAAAAAGPSTSGLVSKWRPKDRMKTGCVALVLCLN
ISVDPPDVIKISPCARMECWIDPFSMAPPKALENIGKTLHSQYERWQPKARYKLQLDPTV
EEVKKLCNTCRKYARSERVLFHYNGHGVPKPTTNGEIWVFNKSYTQYIPLPITDLDSWLK
TPSIYVFDCSAAGIIVKAFLERLDWSSSSSSSSQKDCILLAACEAHQTLPQSAEFPADVF
TACLTTPIKMALHWFCKRSLLRGSMDRSLIDQIPGRQNDRKTLLGELNWIFTAITDTIAW
NVLPHGLFQKLFRQDLLVASLFRNFLLAERIMRSANCSPISYPLLPPTHQHHMWDAWDMA
AEICLSKLPQLIADPNAEFQPSPFFTEQLTAFEVWLDHGSQDKKPPEQLPIVLQVLLSQS
HRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTSAMELRQILVFIWTKILSLDKS
CQVDLVKDGGHTYFIRFLDSLDAYPEQRAMAAFVLAVIVDGHRTGQEACIHAGLIDVCLR
HLQPENPHDAQTEPLLLQWLCLCLGKLWEDFAEAQSLGLQSNAPEILIYLLSEPQPEVQC
LHISSVLSFASFTIYLLNIWYCQVRASAVFALGNLLDMGSTSSNGVDDDSDDDEKVKAEI
NVVRSLLQVSSDGSPLVRCEVAIALTRFALGHNKHLKSVAAEYWKPQTNSLLKSPPSLAN
ISSPSNVYSPNNIRQGSSGLASHIGPVLRVGIDSSATGRDGRVSTSSPIATSSIMHGSPQ
SDDSSQHSDSGILLRENASNGGLSYTRSRPADSVIYSQYISTMCSVAKDPYPRIATIGRR
ALSLIGVEQVVMKNSRFNSGGAHQGETSAPPSNFGMARSSSWFDMNSGNFSIAFRTPPVS
PPQHDYLTGLRRVCSMEFKPHPMNSPEGLADRLISAAAPSNAELSILPQSTIYNWSCGHF
SRPLLSGSDDNEEAHARREEREQIALDCIAKCQRSSACKMTSQIASWDTRFDSGTKAALL
LPFSPIVIAADENEQIRVWNYDDALPVNSFQNHKLSDRGLSKLLLINELDESLLLAASSD
GNVRIWKNFTQKGGQKLVTAFSSVQGHRAAGRSIVIDWQQQSGCLYASGDMSSILVWDLD
KEQLLSTIQSSGDSAISALSASQVRSGHLAAGFVDGSVRIFDVRSPDRLIYMARPHAPRT
EKVVGIGFQPGFDPYKIVSASQAGDIQFLDVRRAAEPYLTIEAHRGSLTALAVHRHAPVV
ASGSAKQMIKVFSLEGEQLTIIRYQPSFMGQRIGSVNCLSFHPYKSLLAAGAGDNALVSI
YAEENYK
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggagatctcatggcgtccaggctcgtccactcctcgtcctcgccgtcgccg
tcgccatcgacggccgcgcccccggcgccgctgccgaatcaccaccacaaccacgtcacg
gatgacctccccgtcgccaacggcccggagcccaggaatgggctggagcccgccgaggtg
gagaagccggcgtccgtggcgtacccgccccaggtggtggtgctgtgcgagcagcgccac
gaggggatcgacgaggctgcggccgccgccgccgggccctccaccagcggccttgtatcc
aagtggcgcccaaaggaccggatgaagacaggatgtgttgcacttgtattatgtttaaac
attagtgttgatccaccagatgtaattaaaatctccccttgcgcaagaatggagtgctgg
atagatccattttctatggcacctcctaaggcccttgaaaatattggaaaaacattgcac
tcacagtatgagcgctggcaacctaaggctcgttacaagcttcagctagatccaactgtg
gaggaagttaaaaagctttgtaatacttgtcgcaaatatgccagatcagagagagtcctt
ttccattacaatggccatggtgtaccaaagcctacaactaatggtgagatttgggtgttt
aacaagagttacacacagtatattccacttccaattactgatcttgattcttggctaaaa
acaccttccatttatgtttttgactgctcagcagctggaattattgtgaaagcttttcta
gagcgcctagactggagttctagctcctcttcatcttcgcagaaggattgcattcttctt
gctgcctgcgaagcacatcaaactcttccccagagtgcagaatttcctgctgatgtgttt
acagcttgcctcacaacacccatcaagatggcattgcactggttttgtaagagatcatta
ctccgtggttctatggatcgttctcttattgaccaaattcctggaaggcaaaatgaccgt
aaaactcttcttggagaactgaattggatttttactgccattacagacactattgcatgg
aatgtgcttcctcatggtctattccaaaagctattcaggcaagatcttctggttgctagt
ctctttcgtaacttcttgcttgctgagagaatcatgcgatccgcaaattgttctccaatt
tcttatccgttgttaccaccgacccatcaacaccatatgtgggacgcatgggacatggct
gctgagatttgcctttccaagcttcctcagttaattgctgatccaaatgcagagtttcag
ccgagcccttttttcacggaacaactgacggcttttgaagtgtggcttgatcatggttct
caggacaagaagccccctgaacagttacctatagttcttcaggtcctgcttagtcaatcg
catagatttagagcgcttgttttgcttggaagatttcttgacatgggaccatgggcagtt
gatttggccctgtctgttggaatatttccttatgtgctcaaactgcttcaaacaagtgca
atggagttgcgtcaaattcttgttttcatatggacgaaaattctctctcttgataagtcg
tgccaggttgacttggttaaagatggaggacatacatattttatcagatttcttgacagt
ttggatgcttacccagagcagcgtgcaatggccgctttcgttttagcagttattgtggat
gggcataggacaggtcaagaggcctgtattcatgcaggtcttatagatgtttgtctgaga
catctgcaacctgaaaatccccatgatgcacagacagagcctttgcttttgcagtggctt
tgtttatgccttggcaaactctgggaagattttgctgaggctcagtcacttggtctgcaa
tcaaatgcaccagaaattttaatttatttgttatcggagccacaacctgaggtacaatgc
cttcatatttcatctgttctttcatttgcttccttcacaatatatttattaaatatttgg
tattgccaggtcagagcttctgctgtttttgcacttgggaatctcctggatatgggatca
acatcatcaaatggtgttgatgatgattctgatgacgatgaaaaagtaaaagctgaaata
aatgtcgttcgaagccttctgcaggtctcttcagatggtagcccccttgttagatgtgag
gttgctatagcgcttactcgttttgcattgggtcacaataagcatctcaaatctgttgct
gctgagtattggaaacctcaaaccaattcattgctgaagtcaccaccatcactggccaat
ataagtagtccaagcaatgtctacagtcccaacaacattcgacaaggcagcagtggcctt
gcttctcatattggtcctgtgctaagggttggcattgatagcagtgccactggtcgtgat
ggaagggtttctacgagcagcccgattgcaacaagtagcatcatgcatggctctccccag
tcagatgattcttcccaacactctgattcaggcatattactgagagagaatgcaagtaat
ggtggcctcagctatactagatcgaggcctgctgacagtgtcatttattctcaatatata
tcaactatgtgttctgttgctaaagatccttacccaagaattgcaactattggccggaga
gcactgtcccttataggtgttgagcaagtggtcatgaaaaacagtagatttaacagtgga
ggtgcacatcaaggagagacatctgcacctccatcaaactttggaatggcacgctcttct
tcctggtttgatatgaattctggaaacttctcaattgcatttaggacgcctcctgttagc
ccccctcaacatgattatcttacaggattacgccgagtatgttcaatggagttcaaacca
catcctatgaattctcctgagggcttagctgatcgccttatctctgctgcggctcccagt
aatgctgaactaagcatacttccccaatcaacaatttacaactggagttgtggacacttc
tctaggccacttttatctggttctgatgataacgaagaagcccatgctagaagagaagag
agagaacaaattgcactagattgcattgctaagtgccagcgatcatcagcttgcaagatg
acaagccaaattgctagttgggatacgaggtttgattcaggtacaaaagcagcattattg
ttgccattttctccaatcgtcatcgcagctgatgaaaatgaacaaataagagtgtggaac
tacgatgatgcactaccagtgaactcttttcaaaaccataaattgtccgacagagggcta
tcaaaactcttgcttatcaatgagcttgatgagagcttgcttttagctgcctcaagtgat
ggaaatgtacgtatatggaaaaattttactcaaaagggaggacaaaaacttgtaactgct
ttctcatcggttcagggtcatcgagctgctggtcgcagtattgtgatcgattggcagcag
caatctggttgcctgtatgcatctggtgacatgtcttccatcttggtatgggatcttgac
aaggaacaacttctcagcaccattcagtcatctggtgacagtgcaatttctgccctgtct
gcatctcaggtccgctctggacacttggctgctggttttgttgatggttctgtaaggata
tttgatgttcgctctcctgataggctgatctatatggcaaggccacatgccccaagaacg
gaaaaggttgtgggcatagggtttcagcctgggtttgatccatacaagattgtaagtgca
tctcaagctggagacattcagtttctcgatgttagaagggcagcagaaccctacctgact
attgaggcacacaggggttcacttactgctttagctgttcatcggcatgccccagttgtt
gctagtggctcagccaagcagatgattaaagtgttcagtcttgaaggagagcagttgacg
ataattcgctaccagccatcatttatgggccaaagaataggcagtgtaaactgcctttct
ttccacccgtacaaatcactcttggccgctggtgctggtgataatgctcttgtctctatc
tacgccgaggaaaattacaagtaa
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integrated database retrieval system
