Panicum virgatum (switchgrass): 120686514
Help
Entry
120686514 CDS
T07260
Name
(RefSeq) calcium-dependent protein kinase 25-like isoform X1
KO
K13412
calcium-dependent protein kinase [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120686514
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120686514
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120686514
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120686514
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CDPK family
120686514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
EF-hand_7
EF-hand_1
EF-hand_6
PK_Tyr_Ser-Thr
EF-hand_5
EF-hand_8
EH
EF-hand_9
DUF5580_M
AIF-1
EFhand_Ca_insen
Kinase-like
EF_EFCAB10_C
Kdo
SPARC_Ca_bdg
SPEF2_C
tRNA_synt_1c_R1
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
120686514
NCBI-ProteinID:
XP_039824667
LinkDB
All DBs
Position
8N:1346816..1349205
Genome browser
AA seq
530 aa
AA seq
DB search
MGQCCAKGAGKGADDAGADGPAAAAPKAGDHGGQPGTKPSSPTGGGRASTSSKPAAPIGG
VLGRPMEDVRATYSMGKELGRGQFGVTHLCTHRATGEKLACKSIAKRKLVAKEDIDDVRR
EVQIMHHLCGQPNVVGLKGAYEDKHNVHLVMELCAGGELFDRIIAKGQYTERAAAELLRT
IVQIVHSCHSMGVMHRDIKPENFLLLSKDEDAPLKATDFGLSVFFKEGEVLRDIVGSAYY
IAPEVLKRRYGPEADIWSVGVMLYIFLAGVPPFWAENENGIFTAILRGQLDLASEPWPHI
SPGAKDLVRKMLNINPKDRLTAFQVLNHPWIKEDGDAPDTPLDNVVLNRLKQFRAMNQFK
KAALRIIAGCLSEEEITGLKEMFKNIDKDNSGTITLDELKNGLAKHGTKLSDGEIQQLME
AADADGNGLIDYDEFVTATVHMNKLDREEHLYTAFQYFDKDNSGYITREELEQALKEQGL
YDADKIKEVISDADSDNDGRIDYSEFVAMMRKGTAGAEPLNNKKRRDVVL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgggccagtgctgcgccaagggcgccgggaagggcgccgacgacgccggcgcggacggc
ccggcggcggcggcacccaaggcgggggaccacggcgggcagcctggtacgaagccgtcg
tcaccgaccggcggcggcagggcgagcacgagcagcaagccggcggcgccgattggcggg
gtgctggggcggccgatggaggacgtgcgcgcgacgtactcgatgggcaaggagctcggg
cgcgggcagttcggcgtgacgcacctgtgcacgcaccgcgcgacgggggagaagctggcg
tgcaagagcatcgcgaagcggaagctggtggccaaggaggacatcgacgacgtgcggcgc
gaggtccagatcatgcaccacctctgcgggcagcccaacgtggtcggcctcaagggcgcc
tacgaggacaagcacaacgtccacctggtcatggagctctgcgccggcggcgagctcttc
gaccggatcatcgccaagggccagtacacggagcgcgccgccgccgagctgctgcgcacc
atcgtgcagatcgtgcacagctgccactccatgggggtgatgcaccgggacatcaagccg
gagaacttcctgctgctcagcaaggacgaggacgcgccgctcaaggccaccgacttcggc
ctctccgtcttcttcaaggaaggcgaggtgctccgggacatcgtcggcagcgcctactac
atcgcgccggaggtgctcaagaggaggtacgggccagaggccgacatctggagcgtcggc
gtcatgctctacatcttcctcgccggcgtgcctcccttctgggcggagaatgagaacggc
atcttcaccgccatcctccgcggccagcttgacctcgccagcgagccatggccgcatatc
tcaccgggagccaaggatcttgtcaggaagatgctcaacatcaaccccaaggaccgcctc
acggcgttccaggtcctcaatcacccatggatcaaagaggatggagatgcacctgatacg
ccacttgacaatgttgttctcaacaggctcaagcagttcagggccatgaaccagttcaag
aaagcagcactgaggatcatagctgggtgcctatctgaagaggagatcaccgggctgaag
gagatgttcaagaacatcgacaaagataacagtggcaccatcacgcttgatgagctcaaa
aacggtttggccaagcatggaaccaagctgtcagacggtgaaattcagcaactgatggaa
gcagctgatgctgatggcaacgggttaattgactacgacgagttcgtcaccgcaacagtg
cacatgaacaaactggacagagaggaacacctttacacagcattccagtatttcgacaag
gacaacagcgggtacattacaagagaggaacttgagcaagccttgaaggagcaagggttg
tatgatgccgataaaatcaaagaggtcatctcagatgccgactctgacaatgatggaagg
atagattattcagagtttgtggcgatgatgaggaaagggacagctggtgctgagccactg
aacaacaagaagaggcgagacgtagtcctatag
DBGET
integrated database retrieval system
