Panicum virgatum (switchgrass): 120686521
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Entry
120686521 CDS
T07260
Name
(RefSeq) neo-calmodulin-like isoform X1
KO
K02183
calmodulin
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04016
MAPK signaling pathway - plant
pvir04070
Phosphatidylinositol signaling system
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120686521
04070 Phosphatidylinositol signaling system
120686521
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120686521
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120686521
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120686521
03036 Chromosome and associated proteins [BR:
pvir03036
]
120686521
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120686521
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Calcineurin (PPP3/ PP2B)
Regulatory subunits
120686521
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120686521
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Centriole replication proteins
120686521
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120686521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
AIF-1
EF-hand_4
SPARC_Ca_bdg
EF-hand_11
Dockerin_1
DUF5580_M
TerB
UPF0154
EFhand_Ca_insen
SurA_N_2
HAD
Sigma54_CBD
SurA_N_3
FlgD
GIP1_N
Motif
Other DBs
NCBI-GeneID:
120686521
NCBI-ProteinID:
XP_039824680
LinkDB
All DBs
Position
8N:complement(1286680..1288374)
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AA seq
220 aa
AA seq
DB search
MDEVEQQLSKQQIEEFREAFSLFDKDGDGTITTKELGTVMRSLGQSPTEEELQEMVKEVD
ADGSGAIDFQEFLTLLARQMREANGADEEELREAFRVFDQDQNGFISRDELRHVLQNLGE
RLSDEELAEMLREADVDGDGQINYTEFAKVMLAKLELESEEPAMPSLLKNGYRVCRWVLA
FRILQMGRQVKRRRRRHQEMEGHGSDSDHAKSTCPSCTIL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggtggagcagcagctgtctaagcagcagatcgaggagttccgggaggccttc
agcctcttcgacaaagatggcgacgggacgatcacgaccaaggagctgggcacggtgatg
cgttcgctggggcagagcccgacggaggaggagctgcaggagatggtgaaggaggtggac
gccgacggcagcggcgccatcgacttccaggagttcctgaccctcctggcgcgccagatg
cgcgaggccaatggcgccgacgaggaagagctccgcgaggccttccgcgtcttcgaccag
gaccagaacggcttcatctcccgcgacgagctccgccacgtcctccagaacctcggcgag
cgcctctctgacgaggagctcgccgagatgctccgcgaggccgacgtcgacggcgacggc
cagatcaactacaccgagttcgcaaaggtcatgctggccaagctcgaattggagtcagag
gaaccggccatgccgtcgctcctgaaaaacggataccgcgtctgtcgctgggttcttgca
tttcggatcttgcaaatgggccgccaagttaaacgccgacggcgacggcaccaggagatg
gaaggccatgggagtgactcggatcacgctaagagcacctgcccctcctgtacaatcctc
tga
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