KEGG   Panicum virgatum (switchgrass): 120686532
Entry
120686532         CDS       T07260                                 
Name
(RefSeq) ubiquitin-like
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03010  Ribosome
pvir04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    120686532
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120686532
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pvir03011]
    120686532
   04121 Ubiquitin system [BR:pvir04121]
    120686532
Ribosome [BR:pvir03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    120686532
  Archaea
    120686532
Ubiquitin system [BR:pvir04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   120686532
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 zf-C4pol TBK1_ULD Ubiquitin_5 Dsc3_N Plexin_RBD Sde2_N_Ubi DUF2604 OTU1_UBXL
Other DBs
NCBI-GeneID: 120686532
NCBI-ProteinID: XP_039824689
LinkDB
Position
2K:complement(55121819..55123265)
AA seq 141 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGSRGGYPTGIEPSLRELAQKYNERKMVCRKCYARLPKRATNCRKK
KCGHSNELRSKKKFMSKIGGT
NT seq 426 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagacgctgacggggaagacgatcacgctggaggtggagagcagc
gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatcccgcccgaccag
cagcgcctcatcttcgccgggaagcagctcgaggacggccgcaccctcgccgactacaac
atccagaaggagtcgacgctgcacctggtgctgcgcctccgcggcggcagcaggggtgga
taccccacggggatcgagcccagcctccgcgagctcgcgcagaagtacaacgagaggaag
atggtctgccgcaagtgctatgcacggcttccaaaaagagctaccaactgccgcaagaag
aagtgtggccacagcaacgagctaaggtcaaagaagaagttcatgtccaagatcggtgga
acttga

DBGET integrated database retrieval system