Panicum virgatum (switchgrass): 120686532
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Entry
120686532 CDS
T07260
Name
(RefSeq) ubiquitin-like
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03010
Ribosome
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
120686532
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120686532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pvir03011
]
120686532
04121 Ubiquitin system [BR:
pvir04121
]
120686532
Ribosome [BR:
pvir03011
]
Ribosomal proteins
Eukaryotes
Large subunit
120686532
Archaea
120686532
Ubiquitin system [BR:
pvir04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120686532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
zf-C4pol
TBK1_ULD
Ubiquitin_5
Dsc3_N
Plexin_RBD
Sde2_N_Ubi
DUF2604
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
120686532
NCBI-ProteinID:
XP_039824689
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All DBs
Position
2K:complement(55121819..55123265)
Genome browser
AA seq
141 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGSRGGYPTGIEPSLRELAQKYNERKMVCRKCYARLPKRATNCRKK
KCGHSNELRSKKKFMSKIGGT
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacgctgacggggaagacgatcacgctggaggtggagagcagc
gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatcccgcccgaccag
cagcgcctcatcttcgccgggaagcagctcgaggacggccgcaccctcgccgactacaac
atccagaaggagtcgacgctgcacctggtgctgcgcctccgcggcggcagcaggggtgga
taccccacggggatcgagcccagcctccgcgagctcgcgcagaagtacaacgagaggaag
atggtctgccgcaagtgctatgcacggcttccaaaaagagctaccaactgccgcaagaag
aagtgtggccacagcaacgagctaaggtcaaagaagaagttcatgtccaagatcggtgga
acttga
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integrated database retrieval system