Panicum virgatum (switchgrass): 120686906
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Entry
120686906 CDS
T07260
Name
(RefSeq) non-lysosomal glucosylceramidase-like isoform X1
KO
K17108
non-lysosomal glucosylceramidase [EC:
3.2.1.45
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00511
Other glycan degradation
pvir00600
Sphingolipid metabolism
pvir01100
Metabolic pathways
pvir04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120686906
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
120686906
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120686906
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.45 glucosylceramidase
120686906
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Ortholog
Paralog
GFIT
Motif
Pfam:
GH116_catalytic
Glyco_hydr_116N
EF-hand_1
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
120686906
NCBI-ProteinID:
XP_039825030
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Position
8N:complement(12784227..12795334)
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AA seq
952 aa
AA seq
DB search
MVENGLDEQPKGVSLNSPPAHVNGDEEKVYPGQLPVLTWKHKLTHVTHNLPSFRLTWKEM
RQLAGIGLRLGRHILEETSKGRTSVIDPMKKRIANSGQGVPLGGIGAGSIGRSYTGNFQR
WQLFPATCEDKPVLANQFSAFISRQDGRKYSTVLHPGKPDLPKGSDISGIRSWDWNMSGQ
HSTYHALYPRAWTVYDGEPDPELNIVCRQISPIIPHNYQQSSYPAAVFTFTVTNSGHTAA
DVTLLFTWANSVGGKSDITGYHSNSSMIEKDGVHGILLHHSRTADGQPPITFAIAAQEKE
DIHISECPYFVISGSSDGFTAKDMWNSVKEHGSFDHLDPIKTPMCSKPGSSIGAAIAASL
KIAPKATQDVSFSLAWACPEVKFSSGKTYHRRYTKFYGTDVDAAASLARDAVLEHTSWER
LIKEWQDPILQDTRFPAWYPVTLFNELYYLNAGGTIWTDGLPPIQSLTGIGGKKFSLDML
NDDDVNEMVQQNNTASDILNRMASVLERMHASIASNSAIGTTLLHGEENIGQFLYLEGIE
YYMWNTYDVHFYASFSLVMLFPKLQLSVQRDFAAAVMMHDPEKLRILHDGKWAARKVLGA
VPHDLGLYDPWFKVNAYTLYNTDRWKDLNPKFVLQVYRDVVATGDKSFARAVWPSVYMAM
AYMEQFDKDKDGMIENEDFPDQTYDVWSMAGISAYCGGLWVAALQAASALAREVGDKASE
KLFWDKYEKAKAVYSKLWNGSYFNYDDGDNKMSTSIQADQLAGQWYANACGLFPIVDKDK
AQSALERIYSFNVMKFKDGTRGAMNGMWPDGTLDMSAMQSREIWPGVTYALAATMIQEGM
VKQGFKTAEGIYHAAWSPEGLGYSFQTPEAWNNDDEYRSLCYMRPLAIWAMQWALSNPKL
HNTPQTDIPQDSSPKTQISYARIAKLLQLPEDESSKSFVRVVYEIIWNRFRS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggtagagaatggtctggatgagcaaccaaaaggggtgtctctgaatagtccacctgct
catgtgaatggtgatgaggaaaaggtttatcctggacagcttccagtgttgacctggaaa
cacaagctaactcatgttacacataatttgccatcattcagacttacatggaaagagatg
agacagctggctggtattggtcttcgtcttggtcgacatatccttgaagaaacttcaaaa
ggacgaacttctgttattgatcctatgaaaaagcgaatcgcaaactccggtcagggtgtt
ccacttggtggcattggtgcaggaagtattggaagaagttacacaggtaacttccaacgt
tggcaattgtttcctgcaacttgtgaggataaacctgtactggcaaaccaattttcagcc
ttcatttcccgccaagatggtagaaaatattccacagtgttgcatcctgggaaaccagat
ttaccaaaaggaagtgacatttcaggaattagatcctgggactggaatatgagtggacaa
cattctacttatcatgctctttaccctagggcctggacagtatatgatggagaacctgat
ccagagctcaacatagtatgccgtcagatatctcctatcattccacacaattatcaacag
agcagctatccagctgcagtattcactttcacagtaaccaattcaggacatacagctgct
gatgtgactttgctttttacatgggctaactctgttggtggaaaatctgatatcacggga
tatcattccaactccagtatgatagaaaaggatggcgttcatggcatactgttacatcac
agcagaacagcagatggtcaaccacctataacttttgcgatagctgcacaggagaaagag
gatattcatatctctgaatgtccttactttgtaatatctgggagctcagatggattcaca
gcaaaagatatgtggaattctgtgaaagagcatggatcttttgatcatcttgatcctata
aaaactccaatgtgctccaagccaggatcgtcaattggggcagctattgccgcttctctt
aagattgctcccaaggcaacccaggatgtttcattttcacttgcatgggcttgtcctgaa
gtaaagttctccagtgggaaaacatatcataggcgttacaccaagttttatgggacagat
gttgatgcagcagcaagccttgctcgtgatgccgttcttgaacatacttcctgggagagg
ctgattaaggagtggcaggatcctattttgcaagacacgaggttccctgcatggtatcca
gttacacttttcaatgagctatattatcttaatgctggaggaactatatggacagatgga
ttgccaccaattcaaagcttgacaggaattggtggtaaaaaattttctcttgacatgttg
aacgatgatgatgtcaatgagatggtccaacagaataatactgcttctgacattcttaat
agaatggcatcagtacttgagaggatgcatgcatctattgcgtcgaattctgctatagga
acaactttgcttcatggcgaagagaacattggccaatttctgtaccttgagggcattgag
tattacatgtggaacacatatgatgtccacttttatgcatcattttcacttgtcatgttg
tttccaaaacttcaacttagtgttcagagagactttgctgctgctgtcatgatgcatgat
cctgaaaagctcaggatcttgcatgatgggaaatgggctgcaagaaaagttcttggtgcc
gttcctcatgatcttggattatatgacccgtggttcaaagtgaatgcatatacactctac
aatactgatcgctggaaggatttgaatccaaagtttgtgctgcaagtttatagagatgtt
gtggccacaggggataaatcctttgcccgagctgtttggccatcagtttatatggcaatg
gcatatatggagcaatttgacaaggataaagatgggatgattgaaaatgaggatttccca
gatcaaacatatgatgtgtggtcgatggctggtataagtgcgtactgcggtggtctttgg
gtggctgctcttcaggctgcatcagccctagcacgggaagttggtgacaaagcttctgaa
aagcttttttgggacaaatatgagaaggccaaggctgtctatagcaagttatggaatggt
tcttacttcaattatgatgatggtgacaacaaaatgagcacatctatccaagcagatcaa
ttggctggacaatggtatgccaacgcctgtggtctcttcccaattgtcgacaaggataag
gcacaaagtgcattagaaaggatatattctttcaatgtgatgaagtttaaggatggtaca
agaggagcaatgaatgggatgtggccagatggcacactggacatgtctgcaatgcagtct
agggagatatggccaggtgtgacatatgcattagctgcgactatgattcaagaaggcatg
gtaaagcaggggtttaaaacagctgaagggatctatcatgctgcctggtctccagaagga
cttggatactcattccaaactcctgaagcttggaacaatgacgacgagtaccggtccctg
tgctacatgcgcccgcttgccatatgggctatgcagtgggcgctgtcaaacccgaagctc
cacaatactcctcagacagatataccccaggattcttcccccaagacccagatctcgtac
gcacgaatcgcaaagctcctgcagttgcctgaggatgagtcgtcaaagagcttcgtccga
gtggtgtatgagatcatctggaacaggtttaggtcctga
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