Panicum virgatum (switchgrass): 120687213
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Entry
120687213 CDS
T07260
Name
(RefSeq) plant UBX domain-containing protein 10-like
KO
K18726
FAS-associated factor 2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120687213
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120687213
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBX
UBA_4
FAF1
UBA_8
CDC45
Motif
Other DBs
NCBI-GeneID:
120687213
NCBI-ProteinID:
XP_039825138
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Position
9N:56846501..56850723
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AA seq
467 aa
AA seq
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MAETVDDKVSYFQAVTGISDPDLCTEILAAHNWDLQVAVSSITANPSSPSASASTSSREQ
GPSAPLADAEFVAPPPPMPPAPQQQQQPGIAWKLVTLPFYVVSGGVGLVAGTFRLGAWVA
GGVLSRSLSLLGLAGQAGGDRLLELPPSAAEAAEFVAEFEREFGAGRGPRFVAEGFSDAL
QRAQREFKLLFVYLHSPDHPDTPAFCGGCLCAEPVAAFIDENFVAWGGSIRRTEGFKMSN
SLNASRFPFCAVVMASTNQRIMLLQQVEGPKSPEEMIIILQRVVEECATSLVAARIEAEE
RLNNQRLREEQDAAYRAALEADQAREQERLEELERREREAAEAERKRKEEEEALARAAEE
AAEKEAALARRRQEKAMALGAEPDKGPGVTRVLIRFPTGERKERRFHSSAPITSLYDYVD
SLDCLEAEKYSLVSNFPRVTYGPEKHSLTLEEAGLHPQASLFIEIEQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaccgtcgacgacaaggtcagctacttccaggccgtcaccggcatctccgac
ccggacctctgcacggagatcctcgccgcgcacaactgggacctgcaggtcgccgtgtcc
tccatcaccgccaacccctcctccccctccgcctccgcctccacgtcctcgcgcgagcag
ggcccgtccgccccgctggcagatgcggagttcgtcgcgcccccgccgccgatgccgccg
gcgccccagcagcagcagcagccggggatcgcgtggaagctggtgacgctccccttctac
gtggtctctggaggggtcggcctcgtcgccggcaccttccgcctcggcgcctgggtcgct
gggggcgtgctgtcccgctccctctccctcctcggcctcgcagggcaggccggcggcgac
cgcctgctcgagctgccgccgtccgccgccgaggcggctgaattcgtcgcggagttcgag
cgcgagttcggcgccggccgcggcccgcgcttcgtggccgaggggttctccgacgcgttg
cagcgagcgcagcgggaattcaagctcctgttcgtgtatctccactctcctgatcacccg
gatacccctgccttctgtgggggctgcctctgcgccgagcccgtcgcggccttcatagat
gagaacttcgttgcgtggggcggtagcatcagaaggaccgaagggttcaagatgagtaac
agcctgaatgcgtcgaggttccccttttgtgctgtggtcatggcttctacgaaccaaaga
atcatgctattgcagcaggttgaagggcctaaatcacctgaagagatgataataattctt
caacgggttgttgaagaatgtgctacatcactcgttgctgccaggattgaagctgaagag
agactaaataaccagcgtttacgtgaagagcaagatgctgcctacagagctgcacttgaa
gctgaccaggccagggaacaggaaaggctagaagaactggaaagacgtgaaagagaggcg
gcagaagctgagagaaaacgtaaagaggaagaggaagctctagcgagggctgccgaagaa
gcagctgaaaaggaagctgctcttgcaaggagaaggcaagagaaagccatggctcttgga
gctgaacctgataaagggcctggcgttactcgggttctcataagatttccgactggagaa
cgcaaagagaggagattccacagctctgcccccatcacttcgctctatgactacgttgat
tctttggattgcttggaagcagagaagtacagcctagtttcgaatttcccacgggtcaca
tacggtccagagaagcactccctgacgctggaagaagcaggcttgcatccacaggcgagc
ctgtttatcgagatagaacaatga
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