Panicum virgatum (switchgrass): 120687247
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Entry
120687247 CDS
T07260
Name
(RefSeq) metacaspase-1-like
KO
K22684
metacaspase-1 [EC:3.4.22.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120687247
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C14: caspase family
120687247
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Motif
Pfam:
Peptidase_C14
Motif
Other DBs
NCBI-GeneID:
120687247
NCBI-ProteinID:
XP_039825170
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Position
9N:61120741..61122444
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AA seq
351 aa
AA seq
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MNCGGRSPATIRCKYCSACLTVTPGERAIQCAQCCGVTRIRRSMRLPLPALPRPAAPTAA
FPCTRGKKRAVLIGITYAGMRRGCGELRGPINDVKCMRQLLCQRFGFPSDCIITLTDDQK
DPFRLPTKDNIRMAMQWLVQGCSYGDSLVFHFSGLGAQVPDEDCDEADGYDEALCPMDSF
QKGPILDDEINEAIVRPLVHGAKLHAVVDACHSATVLDLPFLCHMSRTGNWQWQDHRPPS
GACKDTSGGQAVLISGYSDGKSKFSVTQEACASVGAMTHSFIKAVECEPRGVTYGRLLTS
MKAIMTNGGGSCDLQGPIGAPVRKVANFSGVQEPNLSSSEMFDIYRKPFAL
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaactgcggtggaaggtccccggctacgatccgctgcaagtactgcagcgcgtgcctc
accgtgacccccggcgagcgcgccatccagtgcgcgcaatgctgcggcgtgacgcgcatc
cggcgctccatgcggctcccgttgccggcgctcccgaggccagcggcgccgacggcggcc
ttcccctgcacccgtggcaagaagcgcgccgtccttatcggcatcacgtacgccggcatg
cgccgcggctgcggcgagctgaggggccccatcaacgacgtcaagtgcatgaggcagctc
ctctgccagcgcttcggcttccccagcgactgcatcatcacgctcactgatgaccagaag
gacccgttcaggctgccgaccaaggacaacatccggatggcgatgcagtggctggtgcag
ggctgcagctacggcgactccctggtgttccacttctccggcctgggggcgcaggtcccc
gacgaggactgcgacgaggcggacggctacgacgaggccctctgcccgatggactcgttc
cagaagggccccatcctggacgacgagatcaacgaggccatcgtgcgcccgctggtgcac
ggcgccaagctccacgccgtcgtggacgcctgccacagcgccaccgtcctcgacctcccc
ttcctgtgccacatgtccaggaccgggaactggcagtggcaggaccaccgccccccgtcg
ggcgcctgcaaggacacgagcggcggccaggcggtgctcatcagcggctacagcgacggc
aagagcaagttcagcgtgacccaggaggcctgcgcttcggtgggagccatgacgcacagc
ttcatcaaggcggtggagtgcgagccgcgcggggtcacctacggccgcctgctcacctcc
atgaaggccatcatgaccaacggcggcgggagctgcgacctgcagggccccatcggcgcc
cccgtccgcaaggtcgccaacttcagcggcgtgcaggagcctaacctgtcctcttcggag
atgttcgacatctaccgcaagcccttcgccctgtga
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