Panicum virgatum (switchgrass): 120687271
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Entry
120687271 CDS
T07260
Name
(RefSeq) calmodulin-3
KO
K02183
calmodulin
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04016
MAPK signaling pathway - plant
pvir04070
Phosphatidylinositol signaling system
pvir04075
Plant hormone signal transduction
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120687271
04070 Phosphatidylinositol signaling system
120687271
04075 Plant hormone signal transduction
120687271
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120687271
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120687271
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120687271
03036 Chromosome and associated proteins [BR:
pvir03036
]
120687271
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120687271
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Calcineurin (PPP3/ PP2B)
Regulatory subunits
120687271
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120687271
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Centriole replication proteins
120687271
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120687271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
AIF-1
EH
EF_EFCAB10_C
SPARC_Ca_bdg
EF-hand_11
UPF0154
DUF5580_M
Dockerin_1
RNA_pol_Rpb4
EFhand_Ca_insen
Caleosin
MotA_activ
FCaBP_EF-hand
SPEF2_C
SurA_N_3
PA_Ig-like
DUF6279
Fe_hyd_lg_C
MecA_N
Motif
Other DBs
NCBI-GeneID:
120687271
NCBI-ProteinID:
XP_039825194
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All DBs
Position
9N:complement(66184835..66187199)
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AA seq
149 aa
AA seq
DB search
MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
EVDEMIREADVDGDGQINYDEFVKVMMAK
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctcttc
gacaaggacggcgacggttgcatcacaaccaaggagctgggaactgtcatgcgttccctg
ggtcagaacccaaccgaggctgagctccaggacatgatcaacgaggtcgacgctgatggc
aatggcaccatcgacttccccgagttcctcaacctcatggcccgcaagatgaaggacacc
gactctgaggaggagctcaaggaggcgttcagggtgttcgacaaggaccagaacggcttc
atctccgctgcggagctccgccacgtgatgaccaacctcggcgagaagctgaccgacgag
gaggtcgacgagatgatccgcgaggcggacgttgatggcgatggccagatcaactatgac
gagttcgtcaaggtgatgatggccaagtga
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