Panicum virgatum (switchgrass): 120687290
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Entry
120687290 CDS
T07260
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120687290
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
120687290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF1
CysS_C
Motif
Other DBs
NCBI-GeneID:
120687290
NCBI-ProteinID:
XP_039825209
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All DBs
Position
9N:3075903..3084011
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AA seq
366 aa
AA seq
DB search
SPPEVDTRSAGEVTGHGSQISSAAWAEVTRRAAALNSHSQQEFEDKNSGHPWSQTEIEEF
LATADECNQEPVQKCSLKPGEVLCKHKDKDFEHFAHGLCEKCYNKFTKLSGGLEGGCDPP
AFQRAEKLRLEAAKRTEDAAAAKEAALEESLCDTQNSDVENTLTPSKGISGDKSSEVASE
ERTNDSILFKDPEGGGENCEGDADPENLSDIDDVEVDWYLHNEEETQYKKIIWEEMNKEY
LEEQAAKEALAAELAARGVVVEEGKKKKRRHNEDTKSSKPAETPAEATYNMLKRKGLGSK
VSEGAVGELYKTKDDNGSAHKKEEMDFDAQYGQDNADGETFDHGYYSYDGYDDDGISSSS
ICRTAC
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
agtcctcccgaggttgacactcgttcggcgggggaggtgacgggccatggctcgcagatt
tcaagcgcggcgtgggctgaggtgacccgacgagcggcggcattgaactcacacagccag
caggagttcgaggacaagaactccggccatccatggagtcagactgagattgaagaattt
ctggcgacagctgatgaatgtaatcaagagcctgttcaaaaatgttcactcaagcctgga
gaagttctttgcaagcacaaggataaagattttgagcattttgctcatggactttgtgaa
aaatgctacaacaagttcactaaactgtcaggtggactagaaggtggttgtgaccctcca
gcattccaacgagctgaaaagctaagacttgaagctgctaaaaggactgaagatgctgct
gcagctaaggaggcagcgctggaagaatctctttgtgacacacagaattctgatgttgag
aataccttaactcctagtaagggtataagcggagataaatcttcagaagttgcatctgag
gaacgcacaaatgactctatactgttcaaagaccctgaaggaggaggtgaaaattgtgaa
ggtgatgctgatcctgaaaacctttctgatattgatgatgtagaggttgattggtacctt
cacaatgaggaagaaacacaatataaaaagattatctgggaggaaatgaacaaagagtac
cttgaggaacaagcagcaaaggaagctttggcagctgagttggcagctagaggtgttgtt
gtggaagagggaaaaaagaaaaaacgaagacataatgaagacaccaagagctcaaaacct
gctgaaacaccagcagaagcaacatacaacatgctaaaaagaaagggacttggttcaaag
gttagtgagggagctgttggcgaattatacaagactaaagatgacaatggcagcgcacat
aagaaagaagagatggatttcgacgcacagtatgggcaggacaatgctgatggtgaaaca
ttcgatcatggttactacagctatgatggttatgacgacgatgggatttcgagtagcagc
atttgcagaacggcgtgctga
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