Panicum virgatum (switchgrass): 120687320
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Entry
120687320 CDS
T07260
Name
(RefSeq) alanine aminotransferase 2-like
KO
K00814
alanine transaminase [EC:
2.6.1.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00220
Arginine biosynthesis
pvir00250
Alanine, aspartate and glutamate metabolism
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01200
Carbon metabolism
pvir01210
2-Oxocarboxylic acid metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120687320
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120687320
00220 Arginine biosynthesis
120687320
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120687320
Enzymes [BR:
pvir01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.2 alanine transaminase
120687320
Amino acid related enzymes [BR:
pvir01007
]
Aminotransferase (transaminase)
Class I
120687320
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
120687320
NCBI-ProteinID:
XP_039825231
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Position
9N:complement(33209959..33220595)
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AA seq
484 aa
AA seq
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MAPCALTVDSLNPKVLALADHLGNAAIARRAQCIHNEIEAKRGLHPFDEIMYCNLSNPQS
MGQQPNTFFREVLALCDYPHLLERSETNSLFSSDAIARARKILDLFPWRTTGGYSHCQGT
EGLRDVIAAGITSRDGFPCNAEDIFLTDGSAPPIRMMMHLLIRDEKDGILCPIPSHSLYT
NSMVLQGATLVPYYLEESRGWGVSMSDLKKQLDGARSKGVNVRGLVVINPGNPTGHVLVE
ENQREIVEFCREEGLVLLADEVYQENIYIAGRKFKSFKKIARSMEVDEGDISLVSFHSVS
NGYYGECGSRGGYMEVTGFNSEVKKQVYKVASLSSCSNISGQILMSLVMNPPTVEDESYT
SYQAERNGILSTFSRCAEAMVCALNRLEGVTCCKAEGAMFVFPSVRLPEKAIAAAEEQNT
EPDVFYALRLLENAGIVVVPGSVFGQVPGTWHFRCTILPKEEKIPLFISRFRAFHERFME
EYQD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctccttgcgccctcaccgtcgactccctcaacccaaaggtgctggcgctcgcggat
cacctcggcaacgccgccattgcccgccgtgcccagtgcatccacaatgagatagaagca
aaacgcgggttgcaccctttcgacgagataatgtattgcaacctcagcaatccacagtcc
atggggcaacagccaaacacgtttttccgagaggttcttgccttgtgcgattatccccat
cttctagaacggagtgaaactaattctttattcagctctgatgcaatagcaagggcacgg
aagattctagacctctttccttggagaacaacaggagggtatagccactgtcagggtact
gaaggactgcgtgatgtaatagctgctggaataacatctcgagatggtttcccttgcaat
gcagaagacattttcctgacagatggatcagctccaccgattcggatgatgatgcaccta
ctgatacgggatgaaaaagatggtatcctttgcccaattccatcacattctttgtacaca
aattctatggttctccaaggcgcgactcttgtgccatattaccttgaggaatctagaggt
tggggagtgagcatgtcagatctgaagaagcagctggatggtgcccgatcaaagggtgtt
aatgttaggggacttgtggtgataaatccaggcaaccctactggacatgttcttgtggag
gaaaatcagcgtgaaattgtggaattctgtagggaggaaggccttgttcttctagcagat
gaggtttaccaagaaaacatttacatagctggtaggaaatttaaatctttcaagaagata
gcacggtccatggaggttgacgaaggagacatatctttagtatcctttcattctgtttct
aatggatattacggtgaatgtgggagcaggggaggttatatggaagtcaccggctttaat
tctgaagtaaagaaacaagtgtacaaagttgcatcccttagttcatgctctaatatctcc
ggtcagatcctcatgagcctagtaatgaacccaccaacggttgaggatgagtcatacacc
tcttatcaggcagaaagaaatggaatactatcaactttttctcggtgtgctgaggccatg
gtgtgtgcattgaaccgcctggaaggagtgacttgctgcaaagctgaaggagcaatgttt
gtgttcccttcagtgcgtctgccagaaaaggcaattgcagctgctgaggaacagaacaca
gaaccagatgtattctatgcccttcgtcttcttgaaaacgccgggattgttgttgtgcca
ggttctgtttttggacaagtacccggtacatggcatttcagatgcacaatactgccaaaa
gaagagaagataccactgttcatctcccgctttagggcttttcatgaaaggttcatggaa
gaatatcaagactaa
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