KEGG   Panicum virgatum (switchgrass): 120687361
Entry
120687361         CDS       T07260                                 
Name
(RefSeq) protein EXPORTIN 1A-like
  KO
K14290  exportin-1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03008  Ribosome biogenesis in eukaryotes
pvir03013  Nucleocytoplasmic transport
pvir03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120687361
   03008 Ribosome biogenesis in eukaryotes
    120687361
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120687361
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120687361
   03009 Ribosome biogenesis [BR:pvir03009]
    120687361
   03016 Transfer RNA biogenesis [BR:pvir03016]
    120687361
   03036 Chromosome and associated proteins [BR:pvir03036]
    120687361
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     120687361
Ribosome biogenesis [BR:pvir03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    120687361
  Pre-60S particles
    120687361
Transfer RNA biogenesis [BR:pvir03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    120687361
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     120687361
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 IBN_N CRM1_repeat mTOR_dom
Other DBs
NCBI-GeneID: 120687361
NCBI-ProteinID: XP_039825264
LinkDB
Position
9N:424638..439148
AA seq 1071 aa
MAEKLRDLSQPIDVTLLDATVAAFYGTGSKEERSAADQILRDLQNNPDMWLQVVHILQNS
QNLNTKFFALQVLESVIKYRWNALPVEQRDGIKNYISDVIVQLSSNEVTFRQERLYVNKL
NIILVQVLKHEWPARWSSFIPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEMTQQK
IKELKSSLNSEFRLIHELCLYVLSATQRPELIRATLATLHAFLSWIPVGFIFESPLLETL
LKFFPVAAYRNLTLQCLSEVAALQFGDFYNMQYVKMYTIFMMQLQAILPPETIPDAYANG
SSEEQAFIQNLALFFTSFFKNHMRILEITPENRAALLLGLEYLIGISYVDDTEVFKVCLD
YWNVFVLELFEAHNQMEPAAAVSMMGLQAQMVPGIVDGTGTTVQQRRQLYSGPLSKLRML
MICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEQQMLKK
LSKQLNGEDWSWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKDNKAV
IASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHEMHPGVQDMACDTFLKIVQKCKRKF
VTQQVGENEPFVSELLSNLVTTIADLEPHQIHTFYESVGHMIQAESDNAKRDEYLKRLMS
LPNQKWAEIIGQASQSIDILKNQDVIRSVLNILQTNTSAASSLGPHFFPQISLIFLDMLT
VYRMYSELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPHIGKQFVPP
MMDPVLGDYARNVPDARESEVLSLFATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFE
DYPEHRLKFFSLLRAIGTHCFQALIQLSSQQLKLVIDSINWAFRHTERNIAETGLSLLLE
ILKNFQASGFQNQFYKTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCVVDGLTEPL
WDATSVPYQYTDNAMFIRDYTIKLLGTSFPNMTATEVTKFVDGLLSSKHDLPSFKNHIRD
FLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLAIPGLIAPSELQDEMVDS
NT seq 3216 nt   +upstreamnt  +downstreamnt
atggcggagaagctgagggatctgagccagcccatagacgtgacgctgctcgacgccacc
gtagccgccttctatggcaccggatctaaagaggagaggagcgcagctgatcagatactt
cgtgatctacaaaacaacccggacatgtggcttcaagtagtgcatattctacagaattct
cagaatttgaacaccaagttctttgccctgcaagtacttgaaagtgttatcaagtacagg
tggaacgcattgcctgttgaacaacgtgatggcataaagaattacatatccgatgtcatt
gtgcagctttccagcaatgaagttacctttcgacaggagaggctttatgtcaataaactc
aacattatattggtgcaggtcctgaaacatgagtggcctgccaggtggtcatccttcatc
cctgatcttgttgcagcagcaaagagtagtgaaacaatatgtgaaaattgcatggctata
ttgaagcttctaagcgaagaaatttttgacttctcaagaggtgaaatgacacaacaaaag
attaaagaactgaagtcttcacttaatagtgagttccggctcattcatgagctatgtttg
tatgtcctatctgcaacacaaagaccagagctcattcgtgctacattggcgacactccat
gctttcttgtcatggatccctgttgggttcatctttgagtcaccattgctggaaacccta
ctgaagttcttccctgtggctgcttatcggaatcttacacttcaatgtctatcagaggtt
gctgctcttcagtttggtgacttttataacatgcagtatgtgaagatgtatacaattttc
atgatgcagttgcaggctattcttcctcctgaaacaataccagatgcctatgctaatggc
tccagcgaggagcaggcgtttatacaaaatcttgcgctcttcttcacatctttttttaag
aatcacatgcgtatactggaaataactccagaaaatagagctgctttacttctgggtctg
gagtacctaattggaatttcgtatgttgatgatacagaggttttcaaggtctgcttggat
tactggaatgtgtttgtcttagagttatttgaagcgcacaatcaaatggagcctgcagct
gctgtaagcatgatgggacttcaggcacagatggttcctggaatagtagatgggacgggc
acaacagttcaacagaggagacagctttactctggtccactctcaaaactacggatgctg
atgatttgccggatggcaaagcctgaggaagtattgattgttgaagacgaaaatggcaat
attgtacgtgagacaatgaaagacaatgatgttcttgttcagtataagatcatgagggaa
acactgatctatttgtctcatcttgatcatgaggatacagagcagcagatgttaaagaaa
ttgagcaagcaattaaatggagaagattggagttggaataacctcaatactctatgttgg
gcaattggatcgatatcaggttctatggttgaggagcaggagaatagatttctggttatg
gttattcgtgatttgctaaacctctgtgaaatcaccaaggggaaagacaataaagctgtg
attgcaagtaacatcatgtatgttgttggacagtatccaagatttctcagggctcattgg
aagtttttgaaaactgtggtcaacaaattgtttgagttcatgcatgagatgcatcctgga
gttcaggatatggcatgtgataccttcctgaaaattgtccaaaaatgcaagcgcaaattt
gtcacacaacaggttggcgagaatgaaccatttgtttctgaacttctgtccaaccttgtt
acgacaattgctgatcttgagccacatcagattcatacattttatgaatcagttggccat
atgatacaagctgaatctgataatgctaagagggatgaatacctcaagagattgatgagc
cttcctaatcagaaatgggcagaaataattggacaggcaagccaaagcattgatatcctg
aagaaccaagatgttatcagatcagttctcaacatcttgcagacaaacacaagtgctgcc
agctcccttgggccgcactttttcccacagatttcactaattttcttggacatgctaaca
gtctacagaatgtacagcgagcttgtatcgagcacaattgctgaaggaggaccctttgcc
tcaagaacatcatttgtgaaactcttgagatctgtcaagagggaaaccctgaaattgatt
gagacttttgtagacaaggcagaagatttgccacacatagggaaacagtttgtgcctccg
atgatggatcctgttcttggtgattatgctagaaatgtacctgatgcaagggagtctgaa
gttttgtcattgtttgcaacaatcattaacaagtacaaaggggaaatgcttgaggatgtg
cctcgcatatttgaggctgtttttcagtgcactcttgagatgattacaaagaactttgaa
gattatcctgagcaccgcctcaaatttttttcattgcttcgtgcaattggcacccattgc
ttccaagcattgatccagctttcaagtcagcaattgaagcttgtgatcgactcaattaat
tgggcgttcagacatacagagagaaatattgcagagacaggacttagtctattattggaa
attttgaagaactttcaggcttcaggattccaaaatcaattctataaaacctactttttg
actattgagcaagagatttttgctgtcctcacagacacgttccacaaacctggtttcaag
cttcatgttttggtgctacagcacttgttttgtgtggtggatggtctaactgagcccctt
tgggatgccacttcagtaccatatcaatatacggataatgctatgttcattagagattac
accataaaactcttggggacatcatttcctaacatgacggcaaccgaggtgaccaagttt
gttgatggccttcttagttcaaaacatgatcttccaagctttaaaaatcatattagagac
ttcctggtgcagtcaaaggagttctcggctcaggataacaaggatctatatgccgaagag
gccgcggcccaaagagaaagggagcgccaacggatgcttgccattccggggctcattgcc
ccaagtgaattgcaagatgagatggtagattcatag

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