Panicum virgatum (switchgrass): 120687362
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Entry
120687362 CDS
T07260
Name
(RefSeq) transcriptional repressor ILP1-like
KO
K13211
GC-rich sequence DNA-binding factor
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120687362
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120687362
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
NTR2
Motif
Other DBs
NCBI-GeneID:
120687362
NCBI-ProteinID:
XP_039825265
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All DBs
Position
9N:758124..761507
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AA seq
955 aa
AA seq
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MSSHRKNFRRRADDAEDANGDAGSHPKPTTATKTQTLTVPKPKSPPRRQGASRLSFADDE
DDDDAEEGPFAHRRRPTASVRPARTASPAAASLHRLTPARERLGSSPVAAIAAVSASKPS
NFQSHAGEYTPERLRELQKNARPLPGSLMRAPSSTPLTEPRSQRLAAANASSTPTASTAA
ATEPVVILKGLVKPMAEASIGPRKSLHKEEEDKSEEEEGDEEDEGPVIPDRATIEAIRAK
RQQLQQPRHAAPDYISLDGGGVLSSRDAGGESSDEDDNETRGRIAMYTDKSSDGPRSTKG
VFGGINNRGPAASLGALSDGVKEVEDDRDDDDDEEERRWEEEQFRKGLGRRLDDASSAQR
SANGASAAAQVQPQPFGYSVGSHYQPSLGAVVPAASVFTSGSVEFLSIAQQADVANKALQ
ENIRKLRETHKTTVSALVKTDTHLSEALSEISSLDSGLKNAGDKFVYMQELQNYISVMCD
FLNDKAFYIEELEEHMQKLHENRALAISDRRAADLADESSVIEASVNAAVSILSKGSSSA
HLSAALNAAQAAAAAARESSNLPPELDEFGRDINLQKRMDLKRREENRSRRKTKSESKRM
ASAVKNDGIEKIEGELSTDESDSESTAYVSSRDELLKTADLVFSDASEEYSSLRIVKDKF
EGWRTQYPSAYRDAHVALSVPSVFTPYVRLELLKWDPLHEATDFFDMDWHKVLFDYGAQD
DESASSSNDTDVVPVLVEKVALPILHHRIKHCWDVLSTQRTENAVDAVRMVIGYLPTSSK
DLHQLLACVKGRLTQAIADMSVPAWGSMVTRTVPGAAQYAAYRFGVATRLLKNVCLWKDI
LAGHVVEKLALDELLKGKILPHMKSIILDVHDAITRAERVAASLAGVWGEQSQKLQPFVD
LVVELGNKLERRQMSGISEEETRGLARRLKIILATLNEYDKARAISKKFQLREAL
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccaccgcaaaaacttccgccgccgcgcggacgacgcggaggatgccaacggc
gacgccggcagccaccccaagcccaccaccgccacgaagacccaaaccctaacggtgccc
aagcccaagtcgccgccgaggcgccagggggcgagccgcctcagcttcgccgatgatgag
gacgatgatgacgccgaggagggccccttcgcgcatcgccgccgccctacggcctccgta
cgcccggcccgcaccgcgtccccggctgcggcgtcgctccaccgcctcacgcccgccagg
gagcggctcgggagttcgccggtggctgctatcgcggcggtgtcggcgtcgaagccctcc
aacttccagtcccatgctggggagtatactccagagcgcctccgggagctccagaagaac
gcccgcccactcccggggagcctcatgcgtgcaccgtcgtcgactccactgactgagccc
cggtctcagaggttggcagcagccaatgccagttctacacctactgcctccacggcagct
gcaacagaaccagtggttattctcaaaggcctggtgaaacctatggcagaggcaagcatt
gggccaagaaaatccttgcacaaagaggaggaagataagtctgaggaggaggaaggagat
gaagaggacgaagggccagtaatacctgaccgtgcgaccattgaagccatcagggcgaag
cggcagcagctgcagcagccaaggcacgcggcgccagattatatctcccttgatggtggt
ggtgtgctcagcagcagggatgctggaggtgagtccagtgatgaggatgacaatgagacg
aggggccggattgcaatgtacactgataagtcaagtgatggaccgaggagcacaaaaggt
gtgtttggcgggatcaacaacaggggtcctgctgccagtttgggggctctcagtgatggg
gtcaaggaggttgaggatgacagggatgatgatgacgatgaggaagagagaaggtgggag
gaggagcaattcaggaagggtcttggtaggaggctggatgatgcttcatctgctcaaaga
tcagcaaatggtgcatcagctgctgctcaggttcagccgcagccatttggatactctgtg
ggttcccattaccagccctctcttggtgctgttgtgcctgcggcctctgttttcacctca
ggaagcgttgaattcttatccattgctcaacaagctgatgttgcaaacaaagccctgcaa
gagaacatccgaaagcttagggaaactcacaagacaacagtgagtgctttagtaaaaacc
gacacacatcttagtgaagctctttcagagatatctagcctggatagtggtttgaagaat
gcaggtgataagtttgtctatatgcaggagctccagaattatatttctgtgatgtgtgat
ttcttgaatgacaaggcgttttatattgaggagttggaggagcacatgcagaaactgcac
gaaaatcgagctttagctatttctgataggcgtgcagctgacctagccgatgaatcaagt
gtgattgaagcttccgtaaatgctgcagtatctattcttagcaaaggatcaagctcagct
cacctgtctgctgcattaaatgctgcgcaagctgctgcagctgctgctagggaaagttca
aatctcccacccgagttggatgagtttggcagagatatcaacctccagaaacgtatggat
cttaaacggagggaagagaacaggagtcgaagaaaaaccaagtcagagtcaaagagaatg
gcatctgcagtgaagaatgatggcattgagaagattgaaggagagctaagcactgatgaa
agtgacagtgagagcactgcttatgtttccagccgggatgagttgcttaagactgctgac
cttgtgttcagtgatgcttcagaggaatactcgagccttcgaattgtcaaggacaagttt
gaaggctggagaactcagtacccttctgcgtaccgggatgctcatgtagctctgagtgta
ccatctgtgttcaccccttatgtgagactggagctcctgaagtgggatcccctccatgaa
gcaactgatttcttcgacatggattggcacaaggttctgtttgactatggtgcgcaagat
gatgagagtgcctccagttctaatgatacagatgtggttccagtcctagtagaaaaggtg
gctcttcctattttacaccaccgcattaagcactgctgggatgtattgagtactcaaagg
actgagaacgctgtagatgcagttaggatggtgatcggttatttaccaacgtcgagcaag
gatttgcatcaactactggcttgtgtgaaaggtcgcctaacccaggccattgctgatatg
tcagttccagcctggggatcaatggtgacaagaactgttccaggtgccgctcaatatgct
gcatatagatttggagttgcaacacgtctgcttaagaatgtgtgtctgtggaaagatatc
cttgcggggcatgttgttgagaagcttgctttagatgaactactgaaagggaagattctt
cctcatatgaagagtatcattttggatgttcatgatgcaatcactagggctgagcgagta
gctgcctcacttgcaggagtttggggtgaacaaagtcaaaagttgcagccttttgtagat
ctggttgttgagttaggaaacaagttggagaggagacaaatgtcaggcatcagcgaggaa
gagactcgtggactagctcgtcgattgaaaatcatattggcaacactgaatgagtatgac
aaggctagagctatttcgaagaaatttcagctcagagaagccctttag
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