Panicum virgatum (switchgrass): 120687386
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Entry
120687386 CDS
T07260
Name
(RefSeq) non-specific phospholipase C4-like
KO
K01114
phospholipase C [EC:
3.1.4.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00562
Inositol phosphate metabolism
pvir00564
Glycerophospholipid metabolism
pvir00565
Ether lipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
120687386
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120687386
00565 Ether lipid metabolism
120687386
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
pvir02042
]
120687386
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.3 phospholipase C
120687386
Bacterial toxins [BR:
pvir02042
]
Type II toxins: Membrane damaging toxins
Toxins that enzymatically damage the membrane
120687386
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Gene cluster
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Motif
Pfam:
Phosphoesterase
Motif
Other DBs
NCBI-GeneID:
120687386
NCBI-ProteinID:
XP_039825297
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Position
9N:complement(784519..786419)
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AA seq
524 aa
AA seq
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MAGKIKTVVVLVQENRSFDHMLGWFKSLNPAIDGVTGDETNRVDASDPSSRAVRFSDRAQ
YVDPDPGHSIQAIYEQLYGAPFVDAAATPITPPAVPAPPMSGFAQQAEKEQPGMADTVMS
GFRPDAVPVYRELVREFAVCDRWFASVPASTQPNRLFVHSATSHGLVSNDAKVLVPGLPQ
RTIFDNLHDQGFSFGIYYQYPPSTLFYRNLRRLKYVGNFHQFDLHFRRHCREGKLPNYVV
VEQRYFDLEVLGLPGNDDHPSHDVAEGQRFVKEVYEALRSSPQWEEALLVITYDEHGGFY
DHVPTPVGVPSPDGIVSAAPFFFEFDRLGARVPALFVSPWIEPGTVVHRPPGPHPTSEFE
HSSIPATVKNIFNIDGFLTKRDAWAGTFDSVLTRDTPRTDCPVTLPEPVKLRRTAPVEHA
PLSEFQEELVQLAAVLNGDHTKDSYPHKLVEGMTVAEAAKYCVDAFRAFLDECDRYNKCG
EDGSHIPTVKPPSSAPAPGKNKSSFASKVLACLACGHQSPSSSS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaagatcaagacggtggtggtgctggtgcaggagaaccgctccttcgaccac
atgctgggctggttcaagtcgctcaacccggccatcgacggcgtcaccggcgacgagacc
aaccgcgtggacgcctccgacccctcctcccgcgccgtccgcttcagcgaccgcgcccag
tacgtggacccggacccgggccactccatccaggccatctacgagcagctctacggggcg
cccttcgtcgacgccgccgccacgcccatcacgccgcccgccgtccccgcgccgcccatg
tccggcttcgcgcagcaggcggagaaggagcagcccggcatggcggacacggtcatgagc
ggcttccgccccgacgccgtccccgtctaccgggagctggtgcgcgagttcgccgtgtgc
gaccgctggttcgcctccgtgccggcgtccacgcagcccaaccggctgttcgtgcactcg
gccacctcccatggcctcgtcagcaacgacgccaaggtcctcgtgcccggcctgccgcag
aggacaatcttcgacaacctccacgaccagggcttctccttcggcatctactaccagtac
ccgccctccacgctcttctacagaaacctgcgccggctcaagtacgtcggcaacttccac
cagttcgacctccacttcagacgccattgccgggagggcaagctgcccaactacgtcgtc
gtcgagcagcgctacttcgacctcgaggtcctcggcctccccggcaacgacgaccacccc
tcccacgacgtcgccgagggacagcgcttcgtcaaggaggtctacgaggcgctgcgctcc
agcccgcagtgggaggaggcgctgctcgtcatcacctacgacgagcacggcggcttctac
gaccacgtccccacccccgtcggcgtgcccagccccgacggcatcgtcagcgccgcgccc
ttcttcttcgagttcgaccgcctcggcgcccgcgtcccggcgctcttcgtctcgccgtgg
atcgagccggggaccgtcgtgcacaggccgccgggaccgcacccgacgtcggagttcgag
cactcctccatcccggccaccgtcaagaacatcttcaacatcgacggcttcctgaccaag
cgggacgcctgggccggcaccttcgactccgtgctcacgcgcgacacgccgcgcaccgac
tgcccggtcaccctgcctgagccggtgaagctgcggcggacggcgccggtggagcatgcc
ccgctgtcggagttccaggaggagctcgtccagctcgccgcggtgctcaacggcgaccac
accaaggactcgtacccgcacaagctcgtcgagggcatgacggtggcggaggcggccaag
tactgcgtcgacgctttcagggccttcttggacgagtgcgaccgctacaacaagtgcggc
gaggacggctcccacatccccacagtcaagccgccgtcctctgcgcctgcaccggggaag
aacaagagcagcttcgcgtccaaggtgcttgcttgccttgcgtgtggccatcaatctcca
tcttcctcttcctag
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