Panicum virgatum (switchgrass): 120687391
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Entry
120687391 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 56-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120687391
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120687391
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120687391
NCBI-ProteinID:
XP_039825304
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Position
9N:394654..399161
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AA seq
477 aa
AA seq
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MPMTLAAVAAEVRAQRGIALPLIAMNLTWFAKLAVTTAFLGRLGDLELAAGTLGYSFANV
TGFAVLTGLCGAMEPICGQAHGARNVPLLRRTLVMATLLLLAASVPIALLWVRVDAVLLR
FGQQPDIAATARTYVLCLLPDLAVTSLLSPLKAYLSSQEVTLPTLLAAALGLALHIPLTI
CLSARMGIRGVAAAVWLSDLAVAAMLAAYVVAYELRRRGDTSSSCGGRGSCSWVALLRLA
LPCCLNTCLEWWSYEILVLLTGRLPDARRMVAVVAVTLNFDYLLFAGMLSLSVSASVRVS
NELGAGDAPLARRAARVSMAGGAVAGVAGGLVMLAARRPWARMYTRSPEVRDGVASAMKV
MAALELVNFPLNVCGGIVRGTARPVLGMYAVVGGFYVVALPVGVALGFKARLGLEGLLAG
FLVGAAASLAVLVTVIACMDWAAEADKARRRAGGDSAVREDDSNKEQSSDCNCNAVC
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgacactcgctgccgtggccgccgaggtgcgcgcgcagcgcggcatcgccctc
cccctcatcgccatgaacctcacctggttcgccaagctcgccgtcaccaccgccttcctg
ggccgcctcggcgacctggagctggccgccggcacgctcggctacagcttcgccaatgtc
accggcttcgccgtcctcaccggcctctgcggcgccatggagcccatctgcggccaggcg
cacggcgccaggaacgtgcccctcctccgccggacgctcgtcatggccaccctcctgctc
ctcgcagcctccgtccccatcgcgctcctctgggtgcgcgtcgacgccgtcctcctgcgc
ttcggccagcagcccgacatcgccgccacggccaggacctacgtgctctgcctcctcccg
gacctcgccgtcacctccttgctcagcccgctcaaggcctacctcagctcgcaggaggtg
acgctccccacgctgctggccgccgccctgggcctcgccctccacatcccgctcaccatc
tgcctctccgcgaggatgggcatccggggcgtggccgctgccgtctggctcagcgacctc
gccgtggcggccatgctcgccgcctacgtggtcgcgtacgagctccgccgccgcggggac
accagcagcagctgcggcggtcgcggatcctgcagctgggtggcgctgctccggctggcg
ctgccctgctgcctcaacacgtgcctcgagtggtggtcctacgagatcctggtgctcctg
acagggcgcttgcccgacgcgcgccgcatggtggctgtcgtcgccgtcacgctcaacttc
gattacctcctcttcgccggcatgctttccctgtcagtgagcgcctccgtgcgcgtgtcc
aacgagctgggcgcgggggacgcgcccctggcgcgccgcgccgccagggtgtcgatggcg
ggcggcgcggtggccggcgtggcgggcgggctggttatgctggcggcacggcggccgtgg
gcgcgcatgtacacgcgcagcccggaggtccgcgacggcgtggcgagcgccatgaaggtg
atggcggcgctggagttggtgaacttcccgctgaacgtgtgcggcggcatcgtgcggggc
acggcgcggccggtgctgggcatgtacgcggtggtcggcggcttctacgtggtggcgctg
ccggtgggcgtggcgctggggttcaaggcccggctggggctggagggcctcctggcggga
ttccttgtgggcgccgcggcgagcctggcggtgctcgtgacggtgatcgcgtgcatggac
tgggcggcggaggcggacaaggcgcggaggcgggccggcggggacagcgccgttcgcgag
gacgacagcaacaaggagcaatcgtcagactgcaactgcaatgcagtttgttag
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