Panicum virgatum (switchgrass): 120687410
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Entry
120687410 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120687410 isoform X1
KO
K23398
activating signal cointegrator 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120687410
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
120687410
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ASCH
Motif
Other DBs
NCBI-GeneID:
120687410
NCBI-ProteinID:
XP_039825336
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Position
9N:complement(323723..328214)
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AA seq
377 aa
AA seq
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MYRLLGPAHNHKNGGGPSHDCLGTGPDSSLRLIHRSGRRPPIPRPPNPIGTMRRGGYSGR
GGFGAGHHSSSSSSSSRSSDGRGYHGGNPCLTMHQPWASLLVHGIKRVEGRSWPSPITGR
LWIHAASKVPDPDTIKAMEDFYREIYAVDGITDINFPQHYPVSRLLGCVEVVGCLGSQEL
VCWEHVPQSVRLEGLTDFCWLCENPQKLVVPFEMRGYQGVYNLERRIYDGAVRGLTPVQG
PLPVKFPLPDPRDGLSLKPGSLTFIDAPKSALQKSPSVTAAIAGARAAATQFSKKDHNAA
ATSTSHVREQCSGDGNLPSITVQGSTAAYSQNQDAEPPRRPRLELELPSNRLVTVALREL
KQLRGSERGGGQPVGRS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtatagattattaggtccggcccacaaccacaagaatggaggcggcccatcccacgac
tgtctgggcactgggccggactcctccctccgtctcattcatcgttccggccgccggccg
ccgatcccccgcccccccaatccgatcggcaccatgcgacgcggcggctactctggccgc
ggcggattcggcgccggccaccatagcagcagcagcagcagcagcagcagaagcagcgat
ggcaggggataccatggggggaacccttgcctcacgatgcaccagccgtgggcgtcgctg
ctggtgcacggcatcaagcgcgtcgagggacgctcctggccatccccaatcacaggccgc
ctctggatccacgcagcctccaaggtcccggatcccgacaccatcaaagccatggaggat
ttctacagggagatttatgccgtcgacgggatcacggacatcaacttcccacaacattac
cccgtctcgcgtctcctaggctgcgttgaggtggtaggatgtctcgggtcccaggagctt
gtttgctgggaacatgtgccgcagtctgtgagacttgaagggctgactgacttttgctgg
ctttgtgagaatccacagaagctggtggttcccttcgagatgcgtggttaccagggtgtc
tacaatttggaaagaaggatttatgacggcgctgtgaggggccttacacccgttcaaggt
ccgctgcccgtcaagttccctcttccagatccaagagatggcctctctctcaagccggga
tccctcacattcattgatgctcccaagtccgcgctacaaaagtccccgagtgttaccgca
gccatagccggggctcgagcggcagctactcagttctcaaagaaggatcacaatgccgcc
gctactagtactagtcatgtgcgagagcaatgctcaggtgatggtaatctgccatccatc
actgtccaggggagcactgcagcctactcgcagaaccaggatgctgagcctccgagacgt
ccgagactagaattggagcttccttccaataggcttgttacagtggcactgagggaactg
aagcaattacgcgggagcgagagaggaggagggcaaccagttggcagaagctga
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