Panicum virgatum (switchgrass): 120687422
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Entry
120687422 CDS
T07260
Name
(RefSeq) ER membrane protein complex subunit 2-A-like isoform X1
KO
K23563
ER membrane protein complex subunit 2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120687422
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
ER membrane protein complex
120687422
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_EMC2
TPR_14
TPR_2
TPR_19
TPR_CcmH_CycH
TPR_9
TPR_1
TPR_16
FAD_SOX
TPR_8
Motif
Other DBs
NCBI-GeneID:
120687422
NCBI-ProteinID:
XP_039825355
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Position
9N:1089291..1093820
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AA seq
311 aa
AA seq
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MAAATAAAVPAATAAEEEARLLRLEEQAEHGGGGAWEYLCLARRLRARRPAHALRVGLAL
LNDASARSRLASEQWTLYEQVAVAAMDCQRLDVAKDCIGVLSKQFPGSTRVARLEALLFE
AKGEWAEAERAYALILENNPFDQIVHKRKIAIAKAQGDMSLAADYLNKYLELFMADHDAW
RELAETYVSLQMYKQAAFCYEELILAHPTIPLYHIAYAEVLYTMGGLENLQTAKKYYAST
IQLTGGKNTRALFGVCLCTSAINQLTKGRNKEEDGSELQSLAAEALLKHYKQKAPSKVPL
ISSMLKNMKLS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcgacggcggcggcggttcccgctgccacggcggcggaggaggaggcgcgg
ctgctgcgcctggaggagcaggcggagcacggcggcggcggcgcctgggagtacctctgc
ctcgcccgccgcctccgcgcgcgccgccccgcccacgccctccgcgtcggcctcgccctc
ctcaacgacgcctcagcgcgctcacgcctcgcctcagaacagtggacgctttatgagcag
gttgccgtggcagccatggattgccagcgtctcgatgttgcaaaggactgtattggagtc
ctctcaaagcaatttcctgggagcacccgagttgcccggctagaagctcttctatttgaa
gcgaagggtgaatgggctgaagctgaaagagcctacgcgctaatcctggaaaacaatcca
tttgatcagattgtccacaagaggaaaattgccattgcaaaagcacaaggtgatatgtcc
ttagcggctgattatctcaataagtatctggaattatttatggcagatcatgatgcctgg
agagaacttgctgaaacatatgtttccttacaaatgtacaagcaagctgccttttgttat
gaggagctaatattagcccacccaaccattccactttatcatatagcctatgccgaggtt
ctgtacactatgggtggcttggaaaatcttcagacagctaaaaagtattatgcatcaacg
atccagttaactggaggcaagaatacaagagccctctttggtgtatgtctgtgcacttcg
gcaatcaatcagttgaccaaaggaaggaacaaggaggaagatggctcagagctgcagagc
ttggctgcagaagcactgttgaagcattacaagcaaaaggctccatcaaaggtgcccctt
atcagcagcatgttgaagaacatgaaactctcctga
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