Panicum virgatum (switchgrass): 120687465
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Entry
120687465 CDS
T07260
Name
(RefSeq) probable acyl-activating enzyme 16, chloroplastic isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00061
Fatty acid biosynthesis
pvir00071
Fatty acid degradation
pvir01100
Metabolic pathways
pvir01212
Fatty acid metabolism
pvir04146
Peroxisome
Module
pvir_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120687465
00071 Fatty acid degradation
120687465
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120687465
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvir01004
]
120687465
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120687465
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120687465
Lipid biosynthesis proteins [BR:
pvir01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120687465
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast milk
120687465
Exosomal proteins of breast cancer cells
120687465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120687465
NCBI-ProteinID:
XP_039825391
LinkDB
All DBs
Position
9N:1098649..1107366
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AA seq
732 aa
AA seq
DB search
MLAASSGQMVGLCFPRRSPSPLLSPRRRLLPRRPAARPRGGLPRWRCSSAASPPPPSADS
ALEHPLRRKCSPLLESVLLPGGSDLNVHEWKAVPDIWRTAAEKYPDLVAVIDPYHEPPTE
WTYTQLEQEILDFSQGLRAIGVAPDEKLALFADNSCRWLVADQGIMATGAINVVRGTRSS
DEELFQIYTHSESIAVVVDSPQFFNRLAESFISRINARFIVLLWGDKSCIDSKAVKDIPL
YDYKDMTKLGRESRNTLLLSGHQGQQEVFETIAPEDVATLIYTSGTSGMPKGVMLTHRNL
LHQIKNLWDIVPAEPGDRFVSMLPPWHAYERAFEYFIFTYGIQQVYTTVKYLKEDLQRYQ
PQYIISVPRVYETLYSSIHRQISSSSAARKIIALSLIKISLLYMETKRIYEGTVLSNNPV
QPSFIVYMVKWIWARFIATFLWPLHNLAKILVYKKIHSAIGISKAGISGGGSLPMNVDKF
FEAIGIKVQNGYGLTETSPVVAARRPFCNVLGTVGPPVKHTEIKVFDIETGDVLPDGSKG
IVKIKGPQVMKGYYKNPSATNEALDQEGWFNTGDIGWIAPRHTVGPSQKCGGMLVLEGRA
KDTIVLSTGENVEPAEIEEAASRSNLINQIVVIGQDQRRLGAIVVPNSDEVLAEAKRKSL
VDENGEVAKDKVINMLYDELRTWTAHCSFRIGPIMIVDEPFTIDNGLMTPTMKTRRDKVT
AKYQTEIEALFK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctgcctcgtccggccaaatggtcgggctctgcttcccgcgccgctctccgtcc
ccgctcctcagcccccgccgccgcctcctccctcggcgccccgccgcgaggccgcgcggc
ggcctgccccggtggcggtgctcgtccgccgcctctccgccgcccccgtccgccgactcc
gcgcttgaacatccacttcgtagaaagtgctctcctctacttgagagtgttctattacct
ggcggaagtgacttgaacgtgcatgaatggaaggcagttccagatatctggaggacagca
gcagagaaatatcctgacctcgtagctgtaatagatccttatcatgaaccgccgacagaa
tggacatatacacagcttgaacaagaaatattggatttttctcaaggtctaagggccatt
ggcgttgctccagatgaaaagctagctctatttgctgacaactcatgtcggtggttagtt
gcagatcaaggaatcatggctactggtgcaatcaatgttgttagaggaacaagatcttcc
gatgaagaattgtttcaaatatacactcattcagaaagcattgcagttgttgtggacagt
cctcaattctttaaccggcttgcagaatctttcatatcaaggattaatgcaagattcatt
gtgctactttggggagacaaatcatgcatagatagcaaagctgtgaaggatataccactt
tatgactacaaggatatgactaaacttggccgggagagtcgtaatactctgcttctttct
ggccaccaaggtcagcaagaagtcttcgaaactattgctccagaagatgtggcaacactt
atatatactagtggaacaagtggcatgccgaaaggtgtaatgctgacccaccgaaatctc
ttgcatcagataaagaatttgtgggacattgtaccagcagaacctggtgataggttcgta
agcatgcttccaccatggcatgcttatgagcgtgcttttgagtacttcatcttcacttac
ggaatccagcaagtttacactaccgtcaagtacctgaaggaagatttgcagcgttaccaa
cctcagtatattatatcggtaccacgggtctatgaaactttgtacagttccattcatagg
cagatttcttccagttcggctgctcgaaaaatcattgctctttcacttatcaagataagc
ttactatatatggagaccaagaggatctatgagggaacagttttatcgaacaatcctgtt
caaccatcattcattgtctatatggtcaagtggatatgggcaagatttattgccacattt
ttgtggcctttgcataatctggcaaagatactagtctacaagaaaattcattcagcaatc
gggatttcaaaggctggtattagtggtggtggaagtcttccgatgaatgtcgataagttt
tttgaggccattggcattaaagtacaaaacggctatggcctaactgagacttctcctgtt
gtagctgctagaagaccattctgcaatgttctaggcacggttggccccccagtaaaacat
actgaaatcaaggtttttgacatagagactggtgatgtgcttccagatggttcaaagggg
attgtgaaaattaaaggaccacaagtcatgaagggatactataagaacccatctgctacg
aatgaagctctggatcaagagggttggttcaacactggagatataggttggattgcacct
cgccacaccgtagggccgagtcagaagtgtggagggatgcttgttcttgaaggacgtgca
aaggatacaatagttctctctacaggtgaaaatgttgaacctgctgagattgaggaagca
gctagcaggagtaacttgattaatcagatagttgtgatcggccaggatcaacggcgtctt
ggtgccatagttgttccaaacagtgatgaagttctggcagaagcaaaaaggaagtctctc
gttgatgagaatggcgaagtggcgaaagataaggtcataaacatgctatatgatgagctg
agaacctggaccgcacattgctctttccgcatcggccctatcatgatcgtcgatgaacca
tttacaattgacaacggactgatgacacccaccatgaaaacaagacgggacaaagtgact
gcaaaataccaaacagagatcgaagcgttgttcaagtga
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