Panicum virgatum (switchgrass): 120687833
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Entry
120687833 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 49-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120687833
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120687833
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120687833
NCBI-ProteinID:
XP_039825807
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Position
9N:complement(56628565..56631069)
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AA seq
555 aa
AA seq
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MYEGLLSQLLPPCLGNANKDGGAGGDGRRVGDEVVVSPDVAVVVVNDAATWKEPPSVLAD
RPPLTRGGAASEAASILRLSLPMIMTGLILYVRPMISMLFLGRLGELALAGGSLAIGFAN
ITGHSVLSGLATGMEPVCGQAVGARNLPLVGATMQRMVLLLLAVSVPVAFLWAHMEPLLL
LCGQDAAIAAAAQRYILLCLPDLLFQSFLHPLRIYLRTQSINLPLTACAVLAVAMHLPVN
YVLVSVLSFGVEGVALASALANLHLVLLLLAYIYFSGVHRTTGGFTLSEKLFKDVTGWVR
LARLAVESCASVCLEWWWYEIMILLCGLLANPKATVASMGVLIQTTSLLYIFPSSLSFGV
STRVSNELGANRPGAARAAARAGLALSALQGLASCLFAVSVRGVWARMFTADASILALTA
SVLPILGLCELGNCPQTTGCGVLRGSARPRDGAHINLGAFYVVGTPVAVALAFWAGQGFR
GLWLGLLAAQAACVAVMLVVISRTDWAKQAELAQVLAGVDVNGDGGGKDDTAPRVKVAAP
HGDEDSSSLLITVQG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggggctcctcagccagctgctgccgccgtgcctgggcaatgccaacaaggac
ggcggcgccggcggggatggccgtcgggttggtgatgaggtcgtcgtctctccggacgtc
gctgtcgtcgttgtcaacgacgcggcgacgtggaaggagccgccgtcggtcttggccgac
aggccgccgttgaccaggggcggcgcggcgagcgaggccgcgtcgatcctgcggctgtca
ttgccgatgatcatgacgggcctcatactctacgtccggccgatgatatcgatgctcttc
ctcgggcggctcggcgagctcgccctcgccggcgggtccctcgccatcggcttcgccaac
atcacgggacactcggtcctctccggcctcgccacggggatggagccggtgtgcgggcag
gccgtgggcgccaggaacctccccctcgtcggcgccaccatgcagcggatggtgcttctc
ctcctcgcggtgtccgtgcccgtcgccttcctctgggcgcacatggagccgctgctcctg
ctctgcggccaggacgcggcgatcgccgccgccgcgcagcgctacattctgctctgcctc
ccggacctcctcttccagtcgttcctccaccctctccgcatctacctccggacccagtcc
atcaacctcccgctcaccgcctgcgccgtgctcgccgtcgccatgcacctccccgtcaac
tacgtcctcgtctcggtcctcagcttcggcgtcgaaggcgtcgccctcgcctccgccctg
gccaacctccacctcgtgctcctcctcctcgcctacatctacttctccggcgtgcaccgc
accaccggcggcttcactctttccgagaagctgttcaaggacgttaccgggtgggtgcgg
ctggcccggctcgccgtcgagagctgcgccagcgtctgcctcgagtggtggtggtacgag
atcatgatcctcctctgcggcctcctggccaaccctaaggccaccgtggcgtccatgggg
gtgctcatccagaccacgtccctgctctacatctttccgtcgtcgctcagcttcggcgtg
tcgacgcgcgtcagcaacgagctcggcgcgaaccggccgggcgccgcgcgcgccgcggcc
cgcgcggggctcgcgctgagcgcgctccagggcctggcctcctgcctgttcgccgtgtcc
gtgcgcggcgtgtgggcgcgcatgttcacggcggacgcgtccatcctggcgctcacggcg
tcggtgctgcccatcctggggctgtgcgagctcggcaactgcccgcagaccaccggctgc
ggggtgctccgcgggagcgcgcgccccagggacggcgcgcacatcaacctcggtgcgttc
tacgtcgtgggcacgcccgtggccgtggcgctggcgttctgggctgggcagggcttccgg
ggcctctggcttggcctcctcgcggcgcaggccgcctgcgtcgccgtgatgcttgtggtc
atctcccgcacggactgggccaagcaggccgagctcgcgcaggtgcttgccggagtcgat
gtgaacggagacggcggtgggaaagacgacacggcgccgcgtgtcaaggttgcggcgccc
catggggacgaggactccagcagcttgctcatcactgtgcagggctga
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