Panicum virgatum (switchgrass): 120687914
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Entry
120687914 CDS
T07260
Name
(RefSeq) tubby-like F-box protein 6
KO
K19600
tubby and related proteins
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120687914
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120687914
Cilium and associated proteins [BR:
pvir03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120687914
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Other domain-containing proteins
Tubby family proteins
120687914
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tub
F-box-like
F-box
DUF3527
Motif
Other DBs
NCBI-GeneID:
120687914
NCBI-ProteinID:
XP_039825939
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Position
9N:63840196..63845082
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AA seq
400 aa
AA seq
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MSFRSLIQDMKNEFGSISRHTLRSRSHRSAGNASRAAAAEPSEAMDQSCWSQLPPELLRE
VLVRIEASESWWPARKDVVSCAGVCRTWRGIMKEAVRVPEVSGKLTFPISLKQPGPRDGT
LKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDKVDMSKGSST
YIGKLRSNFLGTKFTVYDAHPPYDGAVVSKSRSARVIGFNQVFPRIPAGNYPVSHISYEL
NVLGSRGPRRMNCVMDSIPASAVEEGGKAPTQTEFPLGSLDSFPSIPFFRSKSARIDTAS
QSSTQKEDRLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVASDDNGSGSQENDKV
ILQFGKIGKDLFTMDYRYPISAFQAFAICLSSFDTKIACE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcaggagcctgattcaggacatgaagaacgagttcgggagcatctcgcggcac
accctgcggtcccggtcccaccggtccgccgggaacgcgtcgcgggcggctgccgcggag
ccgtcggaggccatggatcagagctgctggtcgcagctgccccccgagctcctgcgggag
gtgctggtgaggatcgaggcgtcggagagctggtggcccgcacgcaaggacgtcgtgtca
tgcgccggcgtctgccggacctggaggggcatcatgaaggaggccgtgcgcgtcccggag
gtgtcagggaaactcacgttccccatctcgctcaagcagcctggcccaagggatggcact
cttaaatgtttcatcaggaggaaccggactactcagacatattatctgtatattggactg
acagaagcattggcagatgatggaaagtttttacttgctgcacgcaagtgccggaagccc
acatgtacagactacctaatttctcttgacaaggttgatatgtcaaagggaagcagcacc
tacattggcaagctaagatcaaactttcttggaacaaagttcaccgtctatgatgctcat
ccaccatatgatggagcagtggtctcaaagagtcgttctgcacgtgtgattggttttaac
caggtcttccccagaattcctgctgggaattatcctgtgtcacatatttcgtatgagctg
aatgttctgggatccagaggtccaagaaggatgaactgtgttatggattcaattcctgca
tcagccgttgaggaaggagggaaagctccaacacagactgaatttcctcttggcagcctt
gattctttcccatcaattccattcttcagatctaaatcagctcggatagacacagcttcg
caatcatccactcagaaggaagataggctggtgctgaagaataagtctcccaggtggcat
gaacaactgcagtgttggtgcctgaatttccgtggtcgggtcactgttgcctcggtgaaa
aactttcagctggtggcttcagatgacaacggatcaggtagccaggagaatgacaaggtg
attctccagtttggaaagattggaaaggacttgttcaccatggactaccgttatccaata
tctgcatttcaagcttttgcaatttgcctgagcagtttcgataccaaaatagcctgcgaa
tga
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