Panicum virgatum (switchgrass): 120687916
Help
Entry
120687916 CDS
T07260
Name
(RefSeq) scarecrow-like protein 9
KO
K27753
GRAS family protein LISCL
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120687916
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
GRAS
120687916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
MRP-S31
Motif
Other DBs
NCBI-GeneID:
120687916
NCBI-ProteinID:
XP_039825944
LinkDB
All DBs
Position
9N:69642186..69645860
Genome browser
AA seq
734 aa
AA seq
DB search
MGLDNTYGELSGMFCGGLSYDGYTDHSSTSDYFRFSDPLPAVVPQMVAEPHSNPSSTVSR
ANTETDNPEDWEFISDESLNYISRMLLEEDIDEKVSMYQAESAALRAAAKPFYDILGHKF
PPSPDHQLIPLSVESPSESGSNSCTQSVASTVTSSSIGGAVESNRRYDIGGCEQLEAYGG
LCGQSYQPLVGPSIDACSALGVLEDPLITNGRIPEYLFESLPTWDFRRGIEEAQKFLPVS
NKLVIGMESSGVARPQEERKDASSNARKANVLNAKKNRQSGDLDLMEGRNIKQSAFCSDE
PDWIEMFDDLLRQTEKKATDLRELMRSEASKNSQVTQTKGTSGPRTRGRKPTKKDVVDLR
TILIHCAQAVAADDRRTANELLKQIRHHSKPNGDGTQRLAHCFADGLEARLAGTGSQLYR
KLVAKRATASDMLKAYHLYLAACPFKRLSHFLSNQTILSMTKNASKVHIIDFGIYFGFQW
PCLIRRLSKREGGPPVLRITGIDVPQPGFRPTERIEETGQRLAEYAKKFGVPFEYQGIAS
KWETIRADDIKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIV
NGSYSIPFFITRFREALFHFSALFDMLETTVPRGDPQRALLERDLFGREALNVIACEGSD
RVERPETYKQWQVRNLRAGFVQSPLNQEIVMKAKDKVKDIYHKDFVIDEDSGWLLQGWKG
RIIYAISTWKPKNN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggtctggacaatacttatggggagctatcaggcatgttctgtggaggcctgtcttat
gatggttacacagaccacagcagcacaagtgattatttcaggttcagcgatccactgcct
gctgttgtgccccagatggtagctgaaccccattccaatccttcatccacagtttcaagg
gccaacactgaaactgacaacccagaggattgggagttcatctcagatgaatccctcaac
tatattagccggatgctcttggaggaggatattgatgaaaaagtcagcatgtaccaggcc
gagtcagcggcactgcgtgctgctgcaaagccattctacgacattcttgggcacaagttt
ccaccatctcctgatcaccagctgatacctttgtctgtggagagccccagtgagagtggc
agtaacagttgtacacaatctgtggcgagtaccgttactagcagcagcattggtggcgca
gtggaaagcaatcggcgctatgatattggaggatgtgagcagttagaagcttatggaggc
ttgtgtggtcagtcttatcaaccgcttgttggtccatcaattgatgcttgtagtgcattg
ggtgtgctagaagaccctttgatcacaaatgggcggatacctgagtatttatttgagagc
cttccaacttgggattttaggagaggcattgaggaagcccagaagtttcttcctgttagc
aataaactagtgattggcatggaatctagtggtgtggcaagaccccaagaagaaaggaaa
gatgcttcttcaaatgctaggaaggcaaatgtgttgaatgccaagaaaaacagacagagt
ggagaccttgacctgatggaaggtcggaacattaaacagtctgcattctgttccgatgag
cctgattggattgagatgtttgatgatttacttcggcaaactgagaagaaggctacagat
ctgcgggagctgatgcgcagtgaagcttccaagaattctcaggtcactcagacgaaagga
acaagtgggccacggacacggggaaggaaaccaacaaagaaggatgtggtggaccttaga
accatcctcatccactgcgcacaggctgtggcagctgatgaccgcagaactgctaacgaa
ttgttaaagcaaataaggcatcattccaagccaaatggcgatggcacccagaggttggca
cattgctttgcagatggtctggaggctcgcttggcaggcactgggagccagctttaccgc
aagcttgtggctaaacgcgcaactgcttctgacatgcttaaagcctaccacctttacctt
gcagcatgcccgttcaagaggctctctcattttctttccaatcagacaatcttgagtatg
acaaaaaatgcatcaaaggtgcatatcattgacttcggtatttattttggcttccaatgg
ccatgcctaatcaggcgtctctccaagagggaaggtggcccacctgtgctgcgcataact
ggaattgatgtacctcaaccaggtttccgacctaccgagagaattgaagagactggacaa
aggcttgcagaatatgctaagaagtttggtgtcccttttgagtatcagggaatagcatca
aaatgggaaaccatccgtgctgacgatatcaaagttggcaaggacgaagttgtgattgtt
aattgcctgtaccgcttcaggaatctgatcgatgaaactgttgctgtagacagccctagg
aatagggttctaaacaccataaggcaagtaaacccagcgattttcatccatggaattgtg
aatgggtcgtacagcattcccttcttcatcacacgtttccgtgaggcactgttccatttc
tccgcattgtttgacatgctagagacaactgtcccacggggtgatcctcagcgtgcactt
ttagagagggatctgtttggtcgagaggcactcaatgttattgcatgtgaaggctcggac
agagttgagagacccgagacatacaaacagtggcaggtgaggaacctcagggctggattt
gttcagtcacctttaaaccaagaaattgtgatgaaagccaaggacaaagtgaaagacatt
tatcacaaggacttcgtcatagatgaagacagtggatggctccttcaaggctggaaagga
aggataatctatgccatatctacatggaagcctaagaataactag
DBGET
integrated database retrieval system
