Panicum virgatum (switchgrass): 120687917
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Entry
120687917 CDS
T07260
Name
(RefSeq) beta-amylase 2, chloroplastic
KO
K01177
beta-amylase [EC:
3.2.1.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120687917
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.2 beta-amylase
120687917
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Motif
Pfam:
Glyco_hydro_14
Motif
Other DBs
NCBI-GeneID:
120687917
NCBI-ProteinID:
XP_039825945
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Position
9N:complement(79616471..79619533)
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AA seq
557 aa
AA seq
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MALNLAHQTGAAAAVTAAPAAPRSAVVAAASTVAPSATAPALQAQTVTVDPAPAQAADSV
KPDLAMVCQALVDGKPEAEHADVAAEVRSKEGVPVFVMMPLDTVRKDGNSLNRRRAVEAS
LAALKSAGVEGVMVDVWWGIAEAEGPGQYNFNGYMELMEMARKNGLKVQAVMSFHQCGGN
VGDSVTIPLPKWVLEEMDKDQDLAYTDRSGRRNYEYVSLGCDALPVLKGRTPIQCYADFM
RAFRDHFATYMGNTIVEIQVGMGPAGELRYPSYPESNGTWCFPGIGEFQCYDRYMLSSLK
AAAEAVGKPEWGNAGPSDSGSYKDWPEDTPFFRREGGWNTEYGQFFMSWYSQMLLEHGER
ILSAATGVFTASPGVKISVKVAGIHWHYGTRSHAAELTAGYYNTRQHDGYQPIARMLGRH
GAVLNFTCVEMRDHEQPQDAQCRPEGLVQQVAAAAQEAGIGLAGENALPRYDETAHDQVV
ATAAEKAEEERMVAFTYLRMGPDLFQPDNWRRFAAFVKRMSGAGKRDMCREQVEREASGV
AHATQPLVHEAAVALTN
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaacctcgcgcaccagaccggcgcggcggcggccgtgacggcggccccggcg
gcgccgcgctcggcggtggtcgcggcggcctccaccgtcgcgccgtccgcgacggcgccc
gcgctccaggcgcagacggtgacggtggacccggccccggcgcaggcggcggactcggtg
aagccggacctggccatggtgtgccaggcgctggtggacggcaagccggaggcggagcac
gcggacgtggccgccgaggtcaggagcaaggagggcgtgccggtgttcgtgatgatgccg
ctcgacacggtgcgcaaggacggcaacagcctgaaccggcggagggcggtggaggccagc
ctggcggcgctcaagagcgccggcgtcgagggcgtcatggtggacgtgtggtggggtatc
gccgaggccgagggccccgggcagtacaacttcaacggctacatggagctcatggagatg
gccaggaagaacgggctcaaggtgcaggccgtcatgtccttccaccagtgcggcggcaac
gtcggcgactcagtcaccataccacttccgaaatgggttttggaggagatggacaaggac
caggacctggcctacaccgaccggagcggccgccggaactatgagtacgtctcgctgggc
tgcgacgcgctgcccgtgctcaagggccgcactcccatccagtgctacgccgacttcatg
cgcgccttccgcgaccacttcgccacctacatgggcaacaccatcgtcgagatccaggtc
ggcatgggccccgccggcgagctccgctacccgtcctacccggagagcaacggcacctgg
tgcttcccgggcatcggcgagttccagtgctacgacaggtacatgctgagcagcttgaag
gcggcggctgaggccgtgggcaagccggagtggggcaacgccgggccgagcgactccggc
agctacaaggactggccggaggacacccccttcttccggcgcgagggcgggtggaacacc
gagtacgggcagttcttcatgagctggtactcgcagatgcttctggagcacggcgagcgc
atcctgtcggcggccaccggcgtgttcacggcctcgccgggcgtgaagatctccgtgaag
gtcgccgggatccactggcactacggcacccgctcccacgcggcggagctgacggcgggc
tactacaacacccggcagcacgacgggtaccagccgatcgcgcgcatgctggggcggcac
ggcgccgtgctcaacttcacgtgcgtggagatgcgggaccacgagcagccgcaggacgcg
cagtgccggcccgagggcctggtgcagcaggtggccgcggcggcgcaggaggccggcatc
gggctcgccggcgagaacgcgctgccccggtacgacgagacggcgcacgaccaggtggtg
gcgacggcggcggagaaggccgaggaggagcggatggtggccttcacgtacctccgcatg
ggccccgacctgttccagcccgacaactggcgccgcttcgccgccttcgtcaagcgcatg
tccggcgccggcaagcgggacatgtgccgggagcaggtggagcgggaggcctccggcgtc
gcgcacgccacccagccgctcgtgcacgaggccgccgtcgcgctcaccaactga
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