Panicum virgatum (switchgrass): 120687953
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Entry
120687953 CDS
T07260
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI2
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120687953
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120687953
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120687953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
IBR_1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
120687953
NCBI-ProteinID:
XP_039825993
LinkDB
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Position
9N:73405124..73409675
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AA seq
612 aa
AA seq
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MGRGAEEASPPVSFSELEQEEDDDDCYLSDQEDDALEESVLQVLEDEHLEDCHWSSPSVI
TKESLLLAQREDLRKVIELLGLREHHARTLLIHYRWDVERIFELLDQKGRDRLFSEAGIP
LQYANNAGPSSSTEVTCDVCYEDVPPSAASEMDCGHNYCNDCWTEYFILKINEGQSRRVR
CMAPKCNAICDEAVIRKLVIARRPDLAERFERFLLESYIEDNDTVKWCPSIPHCGNAIRV
KGDIYCEVECTCGCQFCFNCSLQAHSPCSCMMWELWIKKCRDESETVNWITVNTKPCPKC
HKPVEKNGGCNLVACICGQAFCWLCGGATGRDHTWSSISGHSCGRFTDDQTKKTEQARRD
LYRYMHYHNRYKAHTDSLKQEAKLKNDIQGKISISENKESKIKDYSWVINGLNRLFRSRR
VLSYSYPFAFYMFGDEIFKDEMTPGERELKQNLFEDQQQQLEFNVERLSGFLEKDFQNFT
DDEVIDTMKHVINLSNVVDRLCKQMYQCIENDLLYPLRTPHNIAPYKSKGLDRASELDIS
WDSAEQSSQSTKRSQDEHRSQHASTILGKRGLELHGSSSDNRVRPHKRDRPDANGGGALF
DLNVPAEVVDKI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcggtgccgaggaggcctcgccgccggtttccttctctgaattggagcaggag
gaagacgatgacgactgctaccttagcgatcaggaagacgacgccctagaagagtccgtc
ctccaggtcctcgaggacgagcacctcgaggactgccattggtcctccccatccgtgatc
actaaggaatccctcttgttggcacagagagaggatctcaggaaggtgatagagctgcta
gggttgagggagcatcacgcccggacgctcctcatccactacaggtgggacgtcgagagg
attttcgagcttctagatcaaaagggcagggacaggctcttctcagaggctggtattcct
ctccagtacgccaataatgccggcccatcctcctcgacggaggtgacctgcgatgtttgt
tacgaagatgtgcccccctcggctgcctccgagatggactgtggccacaactactgcaac
gattgttggactgaatatttcattttgaaaataaatgagggccagagccggcgtgtcagg
tgcatggctccaaagtgcaatgctatttgtgatgaggcagtaatccggaaactagtcatt
gcaaggagaccagaccttgcagaacgctttgaaagatttttgctggaatcatatattgag
gataatgatacggtaaagtggtgcccaagcataccacattgtggtaacgctatacgtgtc
aaaggtgatatttattgtgaggtggaatgcacatgtggatgccagttttgttttaattgt
tccttacaagcacactcaccgtgttcctgcatgatgtgggagctctggatcaagaaatgc
cgtgatgaatcagaaacagtgaattggataacagtaaatactaaaccttgtcccaagtgt
cacaaacctgtggaaaagaatggtggctgcaacctggttgcatgtatttgtggacaagcg
ttctgttggttatgtggtggtgctactggtagagatcatacatggtcaagtattagtggc
cacagttgtggccggttcactgatgatcagactaagaagacagagcaagcaaggagagac
ctctatagatatatgcactaccacaacagatacaaggctcacactgactctcttaagcag
gaagcaaagctgaagaatgacatccaggggaagatatccatttctgaaaataaggagtcc
aagataaaagattactcctgggtgataaatgggttaaacaggttattccgatcaaggcgt
gttctttcgtattcttatccatttgcattctacatgtttggtgatgagattttcaaggat
gagatgactcctggggaaagagaactgaagcaaaacttattcgaggatcagcagcagcaa
ctagaatttaatgttgaaagactgtctggttttcttgagaaggattttcaaaattttact
gatgatgaggttattgatacaatgaagcatgtcatcaatctctccaatgtggtagatagg
ctctgcaagcaaatgtatcagtgcattgagaatgatttgttgtatcctctgcgcacacct
cacaacattgctccatacaaatccaagggtcttgatagggcatcagagctcgacattagc
tgggattcagctgaacaaagttcgcaatcaacaaaacgtagtcaggatgaacacaggagc
caacatgcatcaactatcctaggaaagcggggtctggagttgcatggctcgagttctgat
aatagggtgcgccctcacaagcgagataggccagatgccaatggtggtggtgcacttttt
gatctcaatgtgccagctgaagtggtggacaagatctga
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