KEGG   Panicum virgatum (switchgrass): 120687965
Entry
120687965         CDS       T07260                                 
Name
(RefSeq) dnaJ protein homolog isoform X1
  KO
K09503  DnaJ homolog subfamily A member 2
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120687965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:pvir03110]
    120687965
   03029 Mitochondrial biogenesis [BR:pvir03029]
    120687965
Chaperones and folding catalysts [BR:pvir03110]
 Heat shock proteins
  HSP40 / DNAJ
   120687965
Mitochondrial biogenesis [BR:pvir03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    120687965
SSDB
Motif
Pfam: DnaJ_C DnaJ DnaJ_CXXCXGXG Anti-TRAP HypA
Other DBs
NCBI-GeneID: 120687965
NCBI-ProteinID: XP_039826013
LinkDB
Position
9N:complement(15050740..15054444)
AA seq 418 aa
MFGRAPKKSDNTKYYEILGVPKSASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV
LSDPEKREIYDQYGEDALKEGMGGGAHVDPFDIFSSFFGPSFGGGGGSSRGRRQRRGEDV
VHPLKVSLEDLYNGTSKKLSLSRSVICSKCKGKGSKSGASMRCPGCQGSGMKITIRQLGP
SMIQQMQTACNECKGTGESINEKDRCPGCKGEKVVQKKKVLEVHVEKGMQHNQKITFPGE
ADEAPDTVTGDIVFVLQQKDHSKFKRKGDDLFYEHTLSLTEALCGFQFVLTHLDNRQLLI
KSNPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFTVEFPDSLAPEQCKALEAVLPPK
LTPKLTDMEIDECEETTMHDVNNIEEEMRRKQAHAAQEAYEEDDEMPGGAQRVQCAQQ
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgttcgggcgcgcgccgaagaagagcgacaacaccaagtactacgagatcctcggggtg
cccaagtccgcatcccaggacgacctcaagaaggcctaccgcaaggccgccatcaagaac
caccccgacaagggcggcgaccccgagaagttcaaggagcttgcacaagcttatgaggtt
ttgagtgatccagagaagcgtgagatttatgatcaatatggtgaagatgccctcaaagaa
ggaatgggtggaggagcccatgtagatccatttgacatcttctcatcattctttggaccc
tcttttggaggaggtggtggcagcagcagaggcagaaggcaaaggaggggagaagatgtc
gtgcatccacttaaagtttctctagaagatctttacaatggtacctcaaagaagctctcg
ctttcacgtagtgtcatctgctccaagtgcaaaggcaagggctccaagtctggtgcttca
atgaggtgcccaggttgccagggttcaggtatgaagatcaccatccgccagctgggtcct
tccatgatacagcagatgcagacagcttgcaatgagtgcaaggggactggagagagcata
aatgagaaggatcgctgcccagggtgcaagggtgagaaggttgttcagaagaagaaggtt
ctggaagttcacgttgagaaggggatgcagcacaaccagaagatcactttccctggcgaa
gctgatgaagcgcctgacactgtcaccggagacattgtattcgtccttcagcagaaggat
cactccaaattcaagagaaagggcgatgatctcttttatgagcacaccttgtctctgact
gaggctctctgtgggttccaatttgttcttacacatctggacaacaggcagcttctcatc
aagtcaaaccctggtgaagttgttaagcctgaccaattcaaggcgataaatgacgagggg
atgccaatgtaccagaggcctttcatgaaggggaagctctacattcacttcacagtagag
ttcccagactcgctggcaccagagcagtgcaaggcccttgaggcggtacttccaccaaag
cttacacccaagctgacagacatggagatagatgagtgtgaggagaccactatgcatgat
gtgaacaacatcgaggaagagatgcgcaggaagcaagctcatgccgcccaggaggcgtac
gaggaggacgacgagatgcctggaggagcccaaagagtgcagtgtgcacaacagtaa

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